Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1708
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 119 3e-27
05_04_0096 - 17931061-17931435,17931539-17931620,17932319-179324... 113 1e-25
05_06_0187 - 26212133-26212477,26212564-26212645,26213066-262131... 109 2e-24
01_06_0546 + 30124693-30124970,30125711-30125861,30125955-301261... 107 1e-23
01_06_0665 - 31003333-31003680,31003773-31003854,31004068-310041... 106 2e-23
07_03_0211 + 15239636-15241132 104 8e-23
05_06_0123 + 25817172-25817470,25818983-25819133,25819217-258193... 103 1e-22
01_01_0638 - 4819365-4819685,4819702-4819882,4820018-4820073,482... 98 7e-21
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 97 2e-20
05_01_0589 - 5281105-5281434,5281532-5281613,5281833-5281963,528... 85 4e-17
03_05_0481 + 24764283-24766109 31 1.2
02_02_0090 + 6676296-6676802,6678550-6678855 29 2.7
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 29 3.5
04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800 29 4.7
07_01_0532 - 3935661-3935720,3936314-3936412,3937804-3937908,393... 28 6.2
04_04_1269 + 32272290-32272321,32272924-32274143,32274390-322744... 28 6.2
01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042... 28 6.2
12_01_1033 + 10629897-10632311,10633874-10633879 28 8.2
10_07_0091 - 12774590-12774664,12774971-12775134,12775249-127753... 28 8.2
01_01_0164 + 1403635-1403708,1403960-1403999,1404103-1404178,140... 28 8.2
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 119 bits (286), Expect = 3e-27
Identities = 63/138 (45%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGTEEGSFLALDLGGTNFRVLFLEL 242
LR+V + E+ AGL S L+M T+V LP G+EEG + ++DLGGTNFRVL +++
Sbjct: 55 LRQVVDAMVVEMHAGLASDGGSKLKMLLTFVDALPSGSEEGVYYSIDLGGTNFRVLRVQV 114
Query: 243 KAGQLL-REKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQSMEKETFSLGFTFSFPM 419
AG ++ +KV+ I + L G E LFNF+A +++FL + + +LGFTFSFP+
Sbjct: 115 GAGSVIVNQKVEQQPIPEELTKGTTEGLFNFVALALKNFLEGEDDQDGKMALGFTFSFPV 174
Query: 420 RQHSISSGELITWTKSFN 473
RQ S+SSG LI WTK F+
Sbjct: 175 RQISVSSGSLIRWTKGFS 192
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +1
Query: 490 GFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYME 663
G DVA L L+ L+V V L+NDT GTL G + D + G N CY+E
Sbjct: 271 GRDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIE 328
>05_04_0096 -
17931061-17931435,17931539-17931620,17932319-17932446,
17932523-17932621,17932739-17932894,17934120-17934194,
17934582-17934749,17934825-17934993,17936640-17936923
Length = 511
Score = 113 bits (273), Expect = 1e-25
Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 9/145 (6%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGT-------EEGSFLALDLGGTNF 221
L+RV E+ AGL S ++M T V LPDG+ EEG A+DLGGT+F
Sbjct: 59 LQRVVNSLAIEMFAGLASDGGSKVRMLLTCVDALPDGSSHDMTRSEEGISYAIDLGGTSF 118
Query: 222 RVLFLELKAGQ-LLREKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQSMEKETFSLG 398
RVL +EL AG ++ KV+H I + L G +DLFNF+A +++F+ + E E +LG
Sbjct: 119 RVLKVELGAGSTIINRKVEHQPIPENLTKGTSDDLFNFIASALKNFIEREGGEVEGRALG 178
Query: 399 FTFSFPMRQHSISSGELITWTKSFN 473
FTFSFP+RQ SISSG LI WTK F+
Sbjct: 179 FTFSFPVRQTSISSGTLIRWTKEFS 203
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 481 EWTGFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYM 660
E G DVA L L+ L++ V VL+N+T GTL G + D + G N CY+
Sbjct: 206 EAVGKDVAQCLNEALARNGLNMKVNVLVNNTVGTLALGHYYDDDTVAAVIIGAGTNACYI 265
Query: 661 E 663
E
Sbjct: 266 E 266
>05_06_0187 -
26212133-26212477,26212564-26212645,26213066-26213196,
26213267-26213365,26213627-26213782,26213891-26213965,
26214156-26214338,26214431-26214581,26215456-26215718
Length = 494
Score = 109 bits (262), Expect = 2e-24
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 8/144 (5%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGTEEGSFLALDLGGTNFRVLFLEL 242
LR+VA+ E+ AGL + S L+M +YV LP G E+G F ALDLGGTNFRVL ++L
Sbjct: 52 LRQVADAMAVEMHAGLASEGGSKLKMIISYVDALPSGEEKGVFYALDLGGTNFRVLRVQL 111
Query: 243 --KAGQLLREKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQS-----MEKETFSLGF 401
K G++++++ I L G +LF+F+A + F+ S+ E LGF
Sbjct: 112 GGKEGRVIKQEHDEISIPPHLMTGGSNELFDFIASSLAKFVASEGEDFHLAEGRQRELGF 171
Query: 402 TFSFPMRQHSISSGELITWTKSFN 473
TFSFP++Q SI+SG LI WTK F+
Sbjct: 172 TFSFPVKQTSIASGTLINWTKGFS 195
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +1
Query: 481 EWTGFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYM 660
E G DV L + L + LD+ V L+NDT GTL G + D +V G N Y+
Sbjct: 198 ETVGEDVVTELTKALERQGLDMKVTALINDTIGTLAGGRYDDNDVIAAVILGTGTNAAYV 257
Query: 661 E 663
E
Sbjct: 258 E 258
>01_06_0546 +
30124693-30124970,30125711-30125861,30125955-30126137,
30126333-30126407,30126535-30126690,30126909-30127007,
30127075-30127205,30127690-30127771,30127846-30128199
Length = 502
Score = 107 bits (256), Expect = 1e-23
Identities = 65/150 (43%), Positives = 88/150 (58%), Gaps = 8/150 (5%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGTEEGSFLALDLGGTNFRVLFLEL 242
LR+VA+ E+ AGL + S LQM TYV LP G E+G F ALDLGGTNFRVL ++L
Sbjct: 57 LRQVADAMAAEMRAGLAAEGGSDLQMLVTYVDSLPSGGEKGMFYALDLGGTNFRVLRVQL 116
Query: 243 --KAGQLLREKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQS-----MEKETFSLGF 401
K +++++ + I L +LF+F+A + F+ S+ E LGF
Sbjct: 117 GGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEGEDCHLPEGTQRELGF 176
Query: 402 TFSFPMRQHSISSGELITWTKSFNCGGMDG 491
TFSFP++Q S++SG LI WTKSF M G
Sbjct: 177 TFSFPVKQKSLASGTLIKWTKSFAIDEMVG 206
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 481 EWTGFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYM 660
E G DV A L + ++ LD+ V L+NDT GTL AG +++ + G N Y+
Sbjct: 203 EMVGKDVVAELNMAIRSQGLDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYI 262
Query: 661 E 663
+
Sbjct: 263 D 263
>01_06_0665 -
31003333-31003680,31003773-31003854,31004068-31004198,
31004272-31004370,31004511-31004666,31004877-31004951,
31005554-31005736,31005833-31005983,31006732-31007027
Length = 506
Score = 106 bits (254), Expect = 2e-23
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 8/150 (5%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGTEEGSFLALDLGGTNFRVLFLEL 242
LR +A+ +E+E GLR P + L+M +YV LP G E G F ALDLGGTNFRV+ ++L
Sbjct: 63 LRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGDEHGLFYALDLGGTNFRVIRVQL 122
Query: 243 --KAGQLLREKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQSM-----EKETFSLGF 401
+ +++ ++ + I L +G +LF+F+A ++ F+ ++ E LGF
Sbjct: 123 GGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGEDFHLPEGRQRELGF 182
Query: 402 TFSFPMRQHSISSGELITWTKSFNCGGMDG 491
TFSFP+ Q SISSG LI WTK F+ G G
Sbjct: 183 TFSFPVHQTSISSGTLIKWTKGFSINGTVG 212
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1
Query: 490 GFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYME 663
G DV A L R + + LD+ V L+NDT GTL G ++D +V G N Y+E
Sbjct: 212 GEDVVAELSRAMERQGLDMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVE 269
>07_03_0211 + 15239636-15241132
Length = 498
Score = 104 bits (249), Expect = 8e-23
Identities = 68/164 (41%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Frame = +3
Query: 15 AQKIEARLSKLMLCGSTLRRVAEV---FEKEIEAGLRQQPSSLQMEN--TYVPELPDGTE 179
AQ++ A L + C + R+AEV E+EAGL + S +M+ +YV LP G E
Sbjct: 41 AQRVVAELREA--CATPAARLAEVAAAMAGEMEAGLAVEGGSSEMKMIVSYVDSLPTGGE 98
Query: 180 EGSFLALDLGGTNFRVLFLELKAGQLLREKVKHYHINDALRLGPG---EDLFNFLADCVQ 350
EGS+ ALDLGGTNFRVL + L G + + I L G G E LF F+A +
Sbjct: 99 EGSYYALDLGGTNFRVLRVRLAGGGVAERVAREVPIPPGLMSGGGATSECLFGFIASALA 158
Query: 351 DFLVSQ----SMEKETFSLGFTFSFPMRQHSISSGELITWTKSF 470
+F+ + ++ LGFTFSFP+ Q SI+SG LI WTK+F
Sbjct: 159 EFVGEEEEEGGLDGGERELGFTFSFPVHQTSIASGTLIRWTKAF 202
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +1
Query: 490 GFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYME 663
G DV A LQ +S R LD+ V L+NDT GTL AG++ D +V G N Y+E
Sbjct: 209 GEDVVAALQAAMSERGLDMRVSALINDTVGTLAAGSYYDEDVVAAVILGTGTNAAYVE 266
>05_06_0123 +
25817172-25817470,25818983-25819133,25819217-25819399,
25819740-25819814,25819985-25820140,25820275-25820373,
25820457-25820587,25821077-25821158,25821251-25821598
Length = 507
Score = 103 bits (247), Expect = 1e-22
Identities = 60/144 (41%), Positives = 87/144 (60%), Gaps = 8/144 (5%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSSL-QMENTYVPELPDGTEEGSFLALDLGGTNFRVLFLEL 242
LR +++ E+E GLR ++ +M TYV LP G E+G F ALDLGGTNFRVL ++L
Sbjct: 64 LRGISDAMVTEMERGLRGDSHAMVKMLITYVDNLPTGNEQGLFYALDLGGTNFRVLRVQL 123
Query: 243 --KAGQLLREKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQS-----MEKETFSLGF 401
K ++++++ + I L +G +LF+F+A + F+ ++ E LGF
Sbjct: 124 GGKEKRVVQQQYEEVSIPPHLMVGTSMELFDFIASALSKFVDTEGDDFHLPEGRQRELGF 183
Query: 402 TFSFPMRQHSISSGELITWTKSFN 473
TFSFP+ Q SISSG LI WTK F+
Sbjct: 184 TFSFPVSQTSISSGTLIKWTKGFS 207
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 490 GFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYME 663
G DV + L + + + LD+ + L+NDT GTL G + D +V G N Y+E
Sbjct: 213 GEDVVSELGKAMERQGLDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNAAYVE 270
>01_01_0638 -
4819365-4819685,4819702-4819882,4820018-4820073,
4820107-4820148,4820484-4820639,4820681-4820809,
4821072-4821254,4821374-4821524,4821670-4821848
Length = 465
Score = 97.9 bits (233), Expect = 7e-21
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Frame = +3
Query: 9 LRAQKIEARL-SKLMLCGSTLRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGTEE 182
+ A+K+ A L + S LR VA E+ AGL ++ S ++M +YV +LP G E+
Sbjct: 4 VEAEKVVAELRERCATPASLLRDVAAAMAGEMGAGLEKEGGSRVKMLLSYVDKLPTGRED 63
Query: 183 GSFLALDLGGTNFRVLFLELKAGQ--LLREKVKHYHINDALRLGPGEDLFNFLADCVQDF 356
G F LDLGGTNFRVL + L + ++ + + I L G +LF F+A + F
Sbjct: 64 GLFYGLDLGGTNFRVLKVHLGGSKKHVVNSESREVSIPPHLMSGTSSELFGFIAGELGKF 123
Query: 357 LVSQSMEKETFS-----LGFTFSFPMRQHSISSGELITWTKSFN 473
+ + + + LGFTFSFP+RQ S++SG L+ WTK+F+
Sbjct: 124 VAEEEEGTDMPNGKKKELGFTFSFPVRQRSVASGTLVKWTKAFS 167
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 96.7 bits (230), Expect = 2e-20
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Frame = +3
Query: 66 LRRVAEVFEKEIEAGLRQQPSS-LQMENTYVPELPDGTEEGSFLALDLGGTNFRVLFLEL 242
LRRVA+ + AGL + L+M ++V LP G E G F ALDLGGTNFRVL ++L
Sbjct: 65 LRRVADAMASGMRAGLADDGAGELKMIPSHVYSLPTGNETGLFYALDLGGTNFRVLRVQL 124
Query: 243 --KAGQLLREKVKHYHINDALRLGPGEDLFNFLADCVQDFLVSQS-----MEKETFSLGF 401
K +++ + + I + G EDLF+F+A + F+ ++ + LGF
Sbjct: 125 GGKDKRIIDTEFEQVSIPREIMHGITEDLFDFIASGLSRFVATEGDKFHLPQGRKRELGF 184
Query: 402 TFSFPMRQHSISSGELITWTKSFNCGGMDG 491
TFSFP+ Q SI SG LI WTK F G G
Sbjct: 185 TFSFPVNQTSIDSGILIKWTKGFAVSGTAG 214
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 490 GFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYRLNRCYME 663
G DV A L + + LD+ V L+NDT GTL + D +V + G N CY++
Sbjct: 214 GKDVVACLNAAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYIQ 271
>05_01_0589 -
5281105-5281434,5281532-5281613,5281833-5281963,
5282029-5282169,5282274-5282429,5282522-5282596,
5282777-5282956,5283097-5283247,5283526-5283612,
5284239-5284349,5284447-5284634
Length = 543
Score = 85.4 bits (202), Expect = 4e-17
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 6/106 (5%)
Frame = +3
Query: 174 TEEGSFLALDLGGTNFRVLFLEL--KAGQLLREKVKHYHINDALRLGPGEDLFNFLADCV 347
TEEG F ALDLGGTNFRVL ++L K ++++ + + I L G +LF F+A +
Sbjct: 130 TEEGLFYALDLGGTNFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASAL 189
Query: 348 QDFLVSQS----MEKETFSLGFTFSFPMRQHSISSGELITWTKSFN 473
F+ + LGFTFSFP+RQ SI+SG LI WTK+F+
Sbjct: 190 AKFVADEGHNAVFNDRQRELGFTFSFPVRQTSIASGTLIKWTKAFS 235
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 463 RASTAAEWTGFDVAALLQRCLSARSLDVTVRVLLNDTTGTLVAGAHIDRNVGIXXDSGYR 642
+A + + G DV A LQ + + LD+ V L+NDT GTL AG++ D ++ + G
Sbjct: 232 KAFSIDDAVGEDVVAELQMAMEKQGLDMRVSALINDTVGTLAAGSYYDEDIVVGVILGTG 291
Query: 643 LNRCYME 663
N Y+E
Sbjct: 292 SNAAYLE 298
>03_05_0481 + 24764283-24766109
Length = 608
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 315 HRDPVAGHHLCDSVSLSHGAIVR 247
H DPVAGHHL D + H +R
Sbjct: 166 HFDPVAGHHLFDGDGMVHAVRIR 188
>02_02_0090 + 6676296-6676802,6678550-6678855
Length = 270
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 494 LMWLPCCRGALAPGVWMSPCECS*MIQLALWSLELISIVTLESAXILGTGSTGVIWSR 667
LM L C +A GVW + + +LA W + ++ + L +A G G W+R
Sbjct: 13 LMALICAVPVIASGVWFASAQGEECARLARWPVAILGGLILLAAL---AGFVGAYWNR 67
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -1
Query: 328 LNRSSPGPSRRASFM**CFTFSRSNCP---AFNSKKRTRKFVPPKSNARNEPSSVPSGN 161
+ R S P R + + T+S S+CP ++ T +VPP+ NA + P GN
Sbjct: 437 MGRPSRPPRRALNRINSSSTYSSSSCPPEPTSSTSGSTSSWVPPRDNASSWAPPPPRGN 495
>04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800
Length = 456
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 253 CPAFNSKKRTRKFVPPKSNARNEPSSVPSGN 161
C AF K R+R PP A +P + P G+
Sbjct: 116 CAAFAEKHRSRSSPPPGPAALQDPEAAPCGS 146
>07_01_0532 -
3935661-3935720,3936314-3936412,3937804-3937908,
3939474-3939666,3940434-3940513,3940607-3940904,
3941139-3941431
Length = 375
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 521 HLCSRAATSNPVHSAAVEALRPSD*FSRGYRMLPHRKREC 402
HL + AATS P VE PS+ YR + R+R C
Sbjct: 61 HLRAAAATSTPADLRVVEPALPSE--KGRYRAVNSRRRRC 98
>04_04_1269 +
32272290-32272321,32272924-32274143,32274390-32274433,
32274883-32275093,32275176-32275413,32275498-32275585,
32275865-32276020,32276370-32276444
Length = 687
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +3
Query: 3 NRLRAQKIEARLSKLMLCGSTLRRVAEVFEKEIEAGLRQQPSSLQMENTYVPELPDGTEE 182
+R++ + + S ++L G ++++ I G QQ S+ ++ TY P+ E
Sbjct: 533 SRMKIIHRDLKASNILLDGEMNPKISDFGMARIFGGNEQQESTRRVVGTYGYMSPEYAME 592
Query: 183 GSFLALDLGGTNFRVLFLEL 242
G+F ++ +F +L LE+
Sbjct: 593 GTF-SVKSDTYSFGILLLEI 611
>01_06_0909 -
32903520-32903828,32903899-32903973,32904068-32904235,
32904508-32904565,32904638-32904879,32905145-32905216,
32905865-32905943,32906734-32907062,32907137-32907256,
32907355-32907429,32908260-32908342,32908942-32908984,
32909271-32909429,32910203-32910281,32910685-32910755,
32910847-32910946,32911023-32911229,32911348-32911442,
32912362-32912436,32912621-32912713,32913078-32913182,
32913851-32913921,32914943-32915096,32916035-32916098,
32916717-32916800,32917543-32917589,32918352-32918411,
32918521-32918592
Length = 1062
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 651 PVEPVPRIXADSNVTIDMSSSDQSASCIIQEHSHGDIQTPGAKAPLQ 511
PV+P + T+ +S + C+I HGD +TP K L+
Sbjct: 343 PVQPFDAVRDRERGTVGISRQSEELRCVIAVIRHGD-RTPKQKVKLK 388
>12_01_1033 + 10629897-10632311,10633874-10633879
Length = 806
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 72 RVAEVFEKEIEAGLRQ---QPSSLQMENTYVPELPDGTE 179
RV+E ++E EA R+ +PS L ++N+Y LPD T+
Sbjct: 663 RVSEGTKREWEAEARRHPNRPSILLLKNSYSTVLPDDTD 701
>10_07_0091 -
12774590-12774664,12774971-12775134,12775249-12775382,
12775463-12775556,12775650-12775758,12776055-12776103,
12778336-12778376,12779539-12779571,12779665-12779754,
12780474-12780507,12781218-12781510,12781859-12782057,
12782129-12782289,12783130-12783282,12783545-12783715,
12783822-12783921,12784023-12784111,12784192-12784290,
12784406-12784676,12784764-12784961,12785041-12785140,
12785799-12785931,12786016-12786277,12787106-12787155
Length = 1033
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 282 HINDALRLGPGEDLFNFLADCVQDF 356
++ DA+RL PGEDL +LA DF
Sbjct: 858 NLRDAVRLPPGEDLNEWLAVNTVDF 882
>01_01_0164 +
1403635-1403708,1403960-1403999,1404103-1404178,
1404680-1405827
Length = 445
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/58 (18%), Positives = 31/58 (53%)
Frame = -2
Query: 366 VKPKNPARSLLRS*TGLHRDPVAGHHLCDSVSLSHGAIVRLSTPKKGPENLYHPNPTL 193
++ + + +L+ S G H P A + +++ + ++ + P++ P+ +YH +P +
Sbjct: 344 LQQQQQSNNLMASMQGYHHHPAATAAMMNNLRGLNNNMMMMHQPQQQPQMMYHRSPQI 401
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,013,982
Number of Sequences: 37544
Number of extensions: 484493
Number of successful extensions: 1391
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -