Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1702
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   1.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   6.0  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 154 LLRLLQHDPDDRISYEEFFSHEYLDLEHMPNKEN 255
           L R  + +P  + +YE F   EY+ L HM  +EN
Sbjct: 689 LERRFEREPKVKEAYEAFMQ-EYITLGHMSVREN 721


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 152 CCYGSCSTTLTTGSRTKSSLATSTS 226
           C Y S STT TT +++ S+ + ST+
Sbjct: 471 CTYSSDSTTTTTTTKSASTSSHSTT 495


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 253  NYERVSLLQRWSRVYSWGSRWGRPVGRAPPSSLYLKDCRPSVSRLTTVLKFFIPNYIHKH 432
            N ERV+ ++RW R +   S  GR   R  P      D    +SR    + FF+  ++  H
Sbjct: 844  NMERVTTMERWQREWD-ESVHGRWTYRLIP------DVNRWISRRFGGVDFFLSQFLSSH 896


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,779
Number of Sequences: 2352
Number of extensions: 13150
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)