Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1698
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12642-1|CAA73189.1|  128|Homo sapiens E48 antigen protein.            31   4.7  
X82693-1|CAA58014.1|  128|Homo sapiens E48 antigen protein.            31   4.7  
U66837-1|AAB07524.1|   79|Homo sapiens E48 antigen protein.            31   4.7  
BC031330-1|AAH31330.1|  128|Homo sapiens lymphocyte antigen 6 co...    31   4.7  
BC022806-1|AAH22806.1|  129|Homo sapiens LY6D protein protein.         31   4.7  
CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               30   6.2  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       30   6.2  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    30   6.2  

>Y12642-1|CAA73189.1|  128|Homo sapiens E48 antigen protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 93  HSTVSSLLSRD*KPTPAIEPTRDTVLSKCCTK*CSPN 203
           HS V    SR  K T  +EP R  ++ K C + C+P+
Sbjct: 34  HSVVCPASSRFCKTTNTVEPLRGNLVKKDCAESCTPS 70


>X82693-1|CAA58014.1|  128|Homo sapiens E48 antigen protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 93  HSTVSSLLSRD*KPTPAIEPTRDTVLSKCCTK*CSPN 203
           HS V    SR  K T  +EP R  ++ K C + C+P+
Sbjct: 34  HSVVCPASSRFCKTTNTVEPLRGNLVKKDCAESCTPS 70


>U66837-1|AAB07524.1|   79|Homo sapiens E48 antigen protein.
          Length = 79

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 93  HSTVSSLLSRD*KPTPAIEPTRDTVLSKCCTK*CSPN 203
           HS V    SR  K T  +EP R  ++ K C + C+P+
Sbjct: 17  HSVVCPASSRFCKTTNTVEPLRGNLVEKDCAESCTPS 53


>BC031330-1|AAH31330.1|  128|Homo sapiens lymphocyte antigen 6
           complex, locus D protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 93  HSTVSSLLSRD*KPTPAIEPTRDTVLSKCCTK*CSPN 203
           HS V    SR  K T  +EP R  ++ K C + C+P+
Sbjct: 34  HSVVCPASSRFCKTTNTVEPLRGNLVKKDCAESCTPS 70


>BC022806-1|AAH22806.1|  129|Homo sapiens LY6D protein protein.
          Length = 129

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 93  HSTVSSLLSRD*KPTPAIEPTRDTVLSKCCTK*CSPN 203
           HS V    SR  K T  +EP R  ++ K C + C+P+
Sbjct: 35  HSVVCPASSRFCKTTNTVEPLRGNLVKKDCAESCTPS 71


>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 609 HITYLAFVSIKNTDDVS*YDRRLTFSSTAISDTSLYDSRM 490
           H+TY      K   D+S  D  LT  +TA+SD+ +Y  R+
Sbjct: 68  HVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRV 107


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 609 HITYLAFVSIKNTDDVS*YDRRLTFSSTAISDTSLYDSRM 490
           H+TY      K   D+S  D  LT  +TA+SD+ +Y  R+
Sbjct: 68  HVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRV 107


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 609 HITYLAFVSIKNTDDVS*YDRRLTFSSTAISDTSLYDSRM 490
           H+TY      K   D+S  D  LT  +TA+SD+ +Y  R+
Sbjct: 68  HVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRV 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,851,538
Number of Sequences: 237096
Number of extensions: 1672623
Number of successful extensions: 2874
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2874
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)