Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1696
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 136 2e-32
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 117 9e-27
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 117 9e-27
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 103 1e-22
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 92 5e-19
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 87 2e-17
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 84 1e-16
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 84 1e-16
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 77 1e-14
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 29 2.9
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 29 3.9
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 29 3.9
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 29 5.1
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 28 6.8
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 28 6.8
Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 8.9
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 28 8.9
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 8.9
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 136 bits (329), Expect = 2e-32
Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 2/127 (1%)
Frame = +3
Query: 60 VLMLVALAGATFAGPE--VTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 233
++ L+ L +A E + +L+ V E C KS+ GD L MHYTGTL DG +FDSS
Sbjct: 6 IVGLLCLLAIAYAADEQKIDKLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSS 65
Query: 234 YDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHF 413
R++ FTF +G G VIKGWDQGLL+MCVGE+R LTIP LGYGERGA IP ++ L F
Sbjct: 66 RTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKF 125
Query: 414 EVELINI 434
+VEL+ I
Sbjct: 126 DVELMKI 132
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 117 bits (282), Expect = 9e-27
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +3
Query: 156 TKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRK 335
TK K+G +T HY TL++G K DSS DR PF F+IG G+VIKGWDQG+ M VGEK K
Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSK 74
Query: 336 LTIPASLGYGERGAGNVIPPHATLHFEVELINI 434
LTI A LGYG RG IP +ATL FEVEL+ +
Sbjct: 75 LTISADLGYGPRGVPPQIPANATLVFEVELLGV 107
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 117 bits (282), Expect = 9e-27
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +3
Query: 156 TKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRK 335
TK K+G +T HY TL++G K DSS DR PF F+IG G+VIKGWDQG+ M VGEK K
Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSK 74
Query: 336 LTIPASLGYGERGAGNVIPPHATLHFEVELINI 434
LTI A LGYG RG IP +ATL FEVEL+ +
Sbjct: 75 LTISADLGYGPRGVPPQIPANATLVFEVELLGV 107
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 103 bits (247), Expect = 1e-22
Identities = 48/94 (51%), Positives = 62/94 (65%)
Frame = +3
Query: 144 EGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVG 323
EGCT K++ GD L YT L+DG DSS+ R++PF F++G GQVIKG D + MC G
Sbjct: 157 EGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQG 216
Query: 324 EKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 425
EKRK+ IP L YGE G IP ++ LHF++ L
Sbjct: 217 EKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = +3
Query: 150 CTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEK 329
C KS+ GD L Y + +G S++ + +P+TF +G G+VI G + + MCVGE+
Sbjct: 41 CKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIHGMEIAMEGMCVGEQ 99
Query: 330 RKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 434
RK+ IP G+ E G V TL++ VEL +I
Sbjct: 100 RKVIIPPEQGFDEDG-DEVEGKGETLYYFVELKSI 133
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 91.9 bits (218), Expect = 5e-19
Identities = 45/89 (50%), Positives = 56/89 (62%)
Frame = +3
Query: 159 KSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKL 338
K G + +HY GTL++G KFDSS DR F+F +G G VIKGWD G+ M GE +
Sbjct: 29 KPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEF 88
Query: 339 TIPASLGYGERGAGNVIPPHATLHFEVEL 425
TI + GYG+ G+ IP ATL FEVEL
Sbjct: 89 TIRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = +3
Query: 156 TKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRK 335
TKSK+G +T HY L DG K DSS DR+ PF F+IG G+VIKGWDQG+ M V EK K
Sbjct: 211 TKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSK 270
Query: 336 LTIPASLGYGERG 374
LTI + G+ E+G
Sbjct: 271 LTIAPAFGF-EKG 282
Score = 58.4 bits (135), Expect = 6e-09
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +3
Query: 165 KHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTI 344
++G ++ + L D + S+Y+ P F+IG G+VI G D G+ M VGE +
Sbjct: 100 ENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHV 159
Query: 345 PASLGYGERGAGNVIPPHATLHFEVELINIG-DSPPATNVFKEIDADKDNM 494
GYG G +IP +A+L +V L N DS V ++I DN+
Sbjct: 160 SGKYGYGRAGFRGLIPRNASLTCKVRLFNCSWDSYAKIGVDRQILVQGDNV 210
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 84.2 bits (199), Expect = 1e-16
Identities = 44/126 (34%), Positives = 69/126 (54%)
Frame = +3
Query: 48 TLRCVLMLVALAGATFAGPEVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFD 227
T++ V + A+ G + E ++ + + E KSK GD + Y L+DG D
Sbjct: 131 TVQLVDLFRAVPGEKWTTDEGIVIE-QTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVD 189
Query: 228 SSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATL 407
SS+ R+ PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP A L
Sbjct: 190 SSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARL 249
Query: 408 HFEVEL 425
+F++ L
Sbjct: 250 YFDITL 255
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +3
Query: 144 EGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVG 323
E C KS+ GD+L Y + DG + S++++ +P+TF +G GQVI G ++ + MC G
Sbjct: 41 EKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKG 99
Query: 324 EKRKLTIPASLGYGERG-AGNVIPPHATLHFEVELINIGDSPP 449
EKRK+ IP +LG+G++G + I TL++ V+L+++ + P
Sbjct: 100 EKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDLFRAVP 142
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 84.2 bits (199), Expect = 1e-16
Identities = 44/126 (34%), Positives = 69/126 (54%)
Frame = +3
Query: 48 TLRCVLMLVALAGATFAGPEVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFD 227
T++ V + A+ G + E ++ + + E KSK GD + Y L+DG D
Sbjct: 167 TVQLVDLFRAVPGEKWTTDEGIVIE-QTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVD 225
Query: 228 SSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATL 407
SS+ R+ PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP A L
Sbjct: 226 SSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARL 285
Query: 408 HFEVEL 425
+F++ L
Sbjct: 286 YFDITL 291
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +3
Query: 144 EGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVG 323
E C KS+ GD+L Y + DG + S++++ +P+TF +G GQVI G ++ + MC G
Sbjct: 77 EKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKG 135
Query: 324 EKRKLTIPASLGYGERG-AGNVIPPHATLHFEVELINIGDSPP 449
EKRK+ IP +LG+G++G + I TL++ V+L+++ + P
Sbjct: 136 EKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDLFRAVP 178
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +3
Query: 114 ELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGW 293
++K E VP C ++K D +T HY +D K +Y P T Q+G G ++ G
Sbjct: 74 DIKIEKTFVPAKCPQQAKRLDFVTFHYKVFTEDNKKVYQTYGTG-PVTIQLGTGMIMPGL 132
Query: 294 DQGLLDMCVGEKRKLTIPASLGYGERGA--GNVIPPHATLHFEVELINIGDSPPATNVFK 467
D+GL MC E RK+ +P + + N+ L F +E++ I P FK
Sbjct: 133 DKGLKGMCAEELRKVRVPYRMSRKSKSKVWKNIPNDENWLIFNIEMVEIKPYTPEIQ-FK 191
Query: 468 EIDADKDNMLSREEVSDYLKK 530
+D ++D L+ +EV D+ KK
Sbjct: 192 FLDLNEDEQLTNKEVQDFQKK 212
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +3
Query: 159 KSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKL 338
K++ GD + Y L+D DSSY R+ PF F++ +VI G D + MC GE+R++
Sbjct: 162 KAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRV 221
Query: 339 TIPASLGYGERGAGNVIPPHATLHFEVEL 425
IP+ GYG +G+ IP A L FE+ L
Sbjct: 222 VIPSEYGYGSQGSPPEIPGGARLFFEIVL 250
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/100 (34%), Positives = 57/100 (57%)
Frame = +3
Query: 150 CTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEK 329
C KS GD++ +Y T + G + S++ + +P+TF +G QVI G D+ + MC+GE
Sbjct: 45 CEIKSAGGDVVDQYYKLTDEKGVEIGSNFGK-KPYTFTLGRNQVIPGMDRAMRGMCIGEI 103
Query: 330 RKLTIPASLGYGERGAGNVIPPHATLHFEVELINIGDSPP 449
RK+ IP LG+ + G L++ V+L+N+ + P
Sbjct: 104 RKVVIPPKLGFAKDSTGQ------PLYYTVQLVNLFRANP 137
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 453 TNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKL 602
TNVF++ID D DN+ +E + + + Q V D + E I+ + +KL
Sbjct: 6 TNVFQQIDGDYDNL--KELLREAVAIQSVSGDPSKRDETIRMVHWMKEKL 53
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 456 NVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKD 635
NV KE+DAD + + EE +KK S++I + ++++L+ E F+ D+D
Sbjct: 91 NVIKEVDADGNGEIDFEEFCACMKK----------SQNI--VKSTNEELIRECFEIFDQD 138
Query: 636 KNXFIS 653
+N I+
Sbjct: 139 RNGIIT 144
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 468 EIDADKDNMLSREEVSDYLKKQMVPADG-GEVSEDIKQMLESHDKLVEEIFQHED 629
E+D+ K +++++ ++ +LKK+ D E +E IK + E DKL +I + E+
Sbjct: 64 EVDSVKQALMNQQMITQHLKKRNEYLDDLEEANERIKILDEELDKLEAKISKTEE 118
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 468 EIDADKDNMLSREEVSDYLKKQMVPADG-GEVSEDIKQMLESHDKLVEEIFQHED 629
E+D+ K +++++ ++ +LKK+ D E +E IK + E DKL +I + E+
Sbjct: 64 EVDSVKQALMNQQMITQHLKKRNEYLDDLEEANERIKILDEKLDKLEAKISKTEE 118
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 543 ADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNXFISHE 659
A G V+ D + + +V+ +F+H D D++ FIS E
Sbjct: 404 ASGVTVAPDNATVSKHISAMVDAVFKHYDHDRDGFISQE 442
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 528 KQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNXFISHEG 662
K ++P + +EDI +LE + KL+ H K FI G
Sbjct: 101 KALLPPKAPQKAEDIDDILEDYHKLIVPGLSHSSSSKFSFILPAG 145
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 462 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN 641
FK D +K+N ++REE L + G ++ D Q+ DK+ ++ + D+D++
Sbjct: 137 FKMYDLNKNNYITREEFKVILNSMV----GANITSD--QL----DKIADKTLEEADQDRD 186
Query: 642 XFISHEGILWDLSTTNFK 695
IS E + T+ +
Sbjct: 187 GKISFEDFCRAMEKTDIE 204
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 513 SDYLKKQM-VPADGGEVSEDIKQMLESH-DKLVEEIFQHEDKDK 638
S++L+ Q +P +G + S+D + LE+H + E +F+ +K K
Sbjct: 298 SEWLQCQSEIPENGIDTSDDFQSFLENHKGRFYESVFRWRNKKK 341
>Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical
protein K08G2.7 protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 578 LLDVFAYFTTVGGNHLLLQIVAHFFAGEHVVLI 480
LL FA+ + + HL QI +FF GEH+ LI
Sbjct: 167 LLVYFAHISNL--KHLNYQIDMYFFFGEHIFLI 197
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -2
Query: 442 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 305
+ P L+ +S+ N + ++LP AP P PK +G++S SPT +++
Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 473 DFLEHVCGRWRVTDVDQL 420
D + HVCG +R+T +DQ+
Sbjct: 232 DNISHVCGIYRITKIDQM 249
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -2
Query: 442 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 305
+ P L+ +S+ N + ++LP AP P PK +G++S SPT +++
Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,987,472
Number of Sequences: 27780
Number of extensions: 380279
Number of successful extensions: 1113
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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