Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1695
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC128263-1|AAI28264.1| 874|Homo sapiens terminal uridylyl trans... 36 0.13
BC110910-1|AAI10911.1| 874|Homo sapiens terminal uridylyl trans... 36 0.13
BC005013-1|AAH05013.2| 578|Homo sapiens TUT1 protein protein. 36 0.13
AK026000-1|BAB15314.1| 874|Homo sapiens protein ( Homo sapiens ... 36 0.13
AK025920-1|BAB15282.1| 535|Homo sapiens protein ( Homo sapiens ... 36 0.13
AL136527-3|CAB89419.1| 1901|Homo sapiens A kinase (PRKA) anchor ... 31 6.4
AF176555-1|AAF07045.1| 1901|Homo sapiens A-kinase anchoring prot... 31 6.4
>BC128263-1|AAI28264.1| 874|Homo sapiens terminal uridylyl
transferase 1, U6 snRNA-specific protein.
Length = 874
Score = 36.3 bits (80), Expect = 0.13
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 444 VQDPFEQSHNLASAITSRLASDIKAYFKHAAN-----AYE-KEKLNRNLEFLKIILLQAP 605
+QDPF+ SHN+A+ +TSR+A ++ + AAN Y+ + R+ L ++ +P
Sbjct: 541 LQDPFDLSHNVAANVTSRVAGRLQNCCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSP 600
Query: 606 NLLRPKTHQEYRVNIFRRIIAAIV 677
+ L T + F ++ AA+V
Sbjct: 601 SSLLSATPIPLPLAPFTQLTAALV 624
>BC110910-1|AAI10911.1| 874|Homo sapiens terminal uridylyl
transferase 1, U6 snRNA-specific protein.
Length = 874
Score = 36.3 bits (80), Expect = 0.13
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 444 VQDPFEQSHNLASAITSRLASDIKAYFKHAAN-----AYE-KEKLNRNLEFLKIILLQAP 605
+QDPF+ SHN+A+ +TSR+A ++ + AAN Y+ + R+ L ++ +P
Sbjct: 541 LQDPFDLSHNVAANVTSRVAGRLQNCCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSP 600
Query: 606 NLLRPKTHQEYRVNIFRRIIAAIV 677
+ L T + F ++ AA+V
Sbjct: 601 SSLLSATPIPLPLAPFTQLTAALV 624
>BC005013-1|AAH05013.2| 578|Homo sapiens TUT1 protein protein.
Length = 578
Score = 36.3 bits (80), Expect = 0.13
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 444 VQDPFEQSHNLASAITSRLASDIKAYFKHAAN-----AYE-KEKLNRNLEFLKIILLQAP 605
+QDPF+ SHN+A+ +TSR+A ++ + AAN Y+ + R+ L ++ +P
Sbjct: 245 LQDPFDLSHNVAANVTSRVAGRLQNCCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSP 304
Query: 606 NLLRPKTHQEYRVNIFRRIIAAIV 677
+ L T + F ++ AA+V
Sbjct: 305 SSLLSATPIPLPLAPFTQLTAALV 328
>AK026000-1|BAB15314.1| 874|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22347 fis, clone HRC06188. ).
Length = 874
Score = 36.3 bits (80), Expect = 0.13
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 444 VQDPFEQSHNLASAITSRLASDIKAYFKHAAN-----AYE-KEKLNRNLEFLKIILLQAP 605
+QDPF+ SHN+A+ +TSR+A ++ + AAN Y+ + R+ L ++ +P
Sbjct: 541 LQDPFDLSHNVAANVTSRVAGRLQNCCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSP 600
Query: 606 NLLRPKTHQEYRVNIFRRIIAAIV 677
+ L T + F ++ AA+V
Sbjct: 601 SSLLSATPIPLPLAPFTQLTAALV 624
>AK025920-1|BAB15282.1| 535|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22267 fis, clone HRC03120. ).
Length = 535
Score = 36.3 bits (80), Expect = 0.13
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 444 VQDPFEQSHNLASAITSRLASDIKAYFKHAAN-----AYE-KEKLNRNLEFLKIILLQAP 605
+QDPF+ SHN+A+ +TSR+A ++ + AAN Y+ + R+ L ++ +P
Sbjct: 202 LQDPFDLSHNVAANVTSRVAGRLQNCCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSP 261
Query: 606 NLLRPKTHQEYRVNIFRRIIAAIV 677
+ L T + F ++ AA+V
Sbjct: 262 SSLLSATPIPLPLAPFTQLTAALV 285
>AL136527-3|CAB89419.1| 1901|Homo sapiens A kinase (PRKA) anchor
protein 11 protein.
Length = 1901
Score = 30.7 bits (66), Expect = 6.4
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Frame = -2
Query: 508 SEASLEVMADAKLCDCSKGSCTQMAEPWRMGSTIFSNTFILYRSNSLGSKNVSLNNAFFI 329
S +S+ V+ +L T ++EPW S YRS++ K+ L FF
Sbjct: 249 STSSVNVLGHKELPSVKTSVTTSISEPWTQRS--------FYRSSNASDKDSDLQKTFFS 300
Query: 328 GAPKYGHTTISSK------LNEE*YSK 266
+P Y + S L+EE Y K
Sbjct: 301 SSPAYSSESECSSPSPVIFLDEEGYQK 327
>AF176555-1|AAF07045.1| 1901|Homo sapiens A-kinase anchoring protein
220 protein.
Length = 1901
Score = 30.7 bits (66), Expect = 6.4
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Frame = -2
Query: 508 SEASLEVMADAKLCDCSKGSCTQMAEPWRMGSTIFSNTFILYRSNSLGSKNVSLNNAFFI 329
S +S+ V+ +L T ++EPW S YRS++ K+ L FF
Sbjct: 249 STSSVNVLGHKELPSVKTSVTTSISEPWTQRS--------FYRSSNASDKDSDLQKTFFS 300
Query: 328 GAPKYGHTTISSK------LNEE*YSK 266
+P Y + S L+EE Y K
Sbjct: 301 SSPAYSSESECSSPSPVIFLDEEGYQK 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,706,079
Number of Sequences: 237096
Number of extensions: 2135933
Number of successful extensions: 4706
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4706
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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