Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1695
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 37 0.015
U21322-4|AAA62540.2| 508|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC087078-2|AAG37940.1| 121|Caenorhabditis elegans Hypothetical ... 30 2.2
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 6.7
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 6.7
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 8.9
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 438 ICVQDPFEQSHNLASAITSRLASDIKAYFKHAANAY--EKEKLNRNLEFL 581
+CV+DPF+ SHNL+S + ++ I F ++ + EK +NR+ FL
Sbjct: 1286 LCVEDPFDLSHNLSSGVNKKMFVFIMKVFINSRAVFMSEKPPMNRDHTFL 1335
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical protein
F23A7.7 protein.
Length = 965
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +3
Query: 378 DRYKMNVLENMVLPMRHGSAICVQDPFEQSHNLASAITSRLASDIKAYFKHAANAYEKE 554
DRY N LE + + + SAI ++D + L++A++S + +K F+HA +AY K+
Sbjct: 864 DRYDFNNLEQCLSGLLY-SAIKLEDENVDTSLLSTAVSSLFTNHLKTRFEHARSAYRKK 921
>U21322-4|AAA62540.2| 508|Caenorhabditis elegans Hypothetical
protein K10D2.2 protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 438 ICVQDPFEQSHNLASAITSRLASDIKAYFKHAANAYEKEKLNRNLEFL 581
+C+ DPFE HNLA + + I++ +H+ + ++ EFL
Sbjct: 397 MCIADPFETDHNLAQGVDMPMFEYIRSCMEHSKKVFTDRRMRS--EFL 442
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 273 YYSSFNFDEMVVCP--YLGAPIKKALFRDTFLLPKEFDRYKMNVLENMVLPMRHGSAICV 446
+++S NFD++V +L AP R+ + +EFD + M MVLP + G V
Sbjct: 207 FFNSINFDDLVFLKNHFLDAPHA----REYVIHYREFDGHPM-----MVLPQKMGLITIV 257
Query: 447 QDPFEQSH 470
DP + H
Sbjct: 258 GDPIDVDH 265
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 273 YYSSFNFDEMVVCP--YLGAPIKKALFRDTFLLPKEFDRYKMNVLENMVLPMRHGSAICV 446
+++S NFD++V +L AP R+ + +EFD + M MVLP + G V
Sbjct: 137 FFNSINFDDLVFLKNHFLDAPHA----REYVIHYREFDGHPM-----MVLPQKMGLITIV 187
Query: 447 QDPFEQSH 470
DP + H
Sbjct: 188 GDPIDVDH 195
>AC087078-2|AAG37940.1| 121|Caenorhabditis elegans Hypothetical
protein Y34F4.3 protein.
Length = 121
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 438 ICVQDPFEQSHNLASAITSRLASDIKAYFKHAANAY 545
+C+ DPF+ HNL + ++ I++ +H+ +
Sbjct: 62 MCIADPFKTDHNLEQGVVLQMFEFIRSCMEHSMEVF 97
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine
nucleotide exchange factorfor RAS protein.
Length = 1413
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 639 RVNIFRRIIAAIVDPDLEIRSQXNSVXDIRETAEXTLGKCEETMKPAVK 785
R+N+FRR I ++ D++ + N ++ E + L K E T++ A++
Sbjct: 265 RINVFRRRIESVAATDVDKQIVCNLFGNLTEIHDLAL-KIERTLEDAIE 312
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 639 RVNIFRRIIAAIVDPDLEIRSQXNSVXDIRETAEXTLGKCEETMKPAVK 785
R+N+FRR I ++ D++ + N ++ E + L K E T++ A++
Sbjct: 265 RINVFRRRIESVAATDVDKQIVCNLFGNLTEIHDLAL-KIERTLEDAIE 312
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 297 EMVVCPYLGAPIKKALFRDTFLLPKEFDRYKMNVLENMVLPMRHGSA 437
++ C Y ++ ++ D L PK FDR K N+ E + RH A
Sbjct: 71 DLYPCEYYRI-VEHSMPTDIGLQPKRFDRIKENLTEKLQQVFRHQDA 116
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 469 CDCSKGSCTQMAEPWRMGSTIFSNTFILYRSNSLGSKNVSLNNAFFIGA 323
C+ + G+ + W G+ + F+ NSL S N S N+ + GA
Sbjct: 1029 CNGTAGNFVNNTQTWIGGAVDSTGDFLSNTWNSLSSNNTSGNSTWIAGA 1077
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,101,256
Number of Sequences: 27780
Number of extensions: 341718
Number of successful extensions: 906
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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