Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1682
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   225   3e-59
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   225   3e-59
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   215   2e-56
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.65 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.65 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.65 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  225 bits (549), Expect = 3e-59
 Identities = 110/140 (78%), Positives = 122/140 (87%)
 Frame = +1

Query: 1   QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 180
           Q ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+TG+
Sbjct: 4   QNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGD 62

Query: 181 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 360
           V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDI
Sbjct: 63  VRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDI 122

Query: 361 VTIGECRPLSKTVRFNVLKV 420
           VTIGECRPLSKTVRFNVLKV
Sbjct: 123 VTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  225 bits (549), Expect = 3e-59
 Identities = 110/140 (78%), Positives = 122/140 (87%)
 Frame = +1

Query: 1   QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 180
           Q ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+TG+
Sbjct: 4   QNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGD 62

Query: 181 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 360
           V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDI
Sbjct: 63  VRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDI 122

Query: 361 VTIGECRPLSKTVRFNVLKV 420
           VTIGECRPLSKTVRFNVLKV
Sbjct: 123 VTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  215 bits (526), Expect = 2e-56
 Identities = 103/140 (73%), Positives = 121/140 (86%)
 Frame = +1

Query: 1   QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 180
           QTERSF+KQ  V + R+K   +K+  +P R+++ +GLGF+ P EAI+GTYIDKKCP+TG+
Sbjct: 5   QTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCPWTGD 61

Query: 181 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 360
           V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDI
Sbjct: 62  VRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDI 121

Query: 361 VTIGECRPLSKTVRFNVLKV 420
           VTIGECRPLSKTVRFNVLKV
Sbjct: 122 VTIGECRPLSKTVRFNVLKV 141


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 184 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 324
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 184 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 324
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 184 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 324
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,351,742
Number of Sequences: 53049
Number of extensions: 403970
Number of successful extensions: 1018
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)