Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1677
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             67   4e-13
AY745221-1|AAU93488.1|   95|Anopheles gambiae cytochrome P450 pr...    23   7.0  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   9.2  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 67.3 bits (157), Expect = 4e-13
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = +1

Query: 331 SRLPSNLAKNRYTDVLCYDHSRVLLSQTDPDDPTTDYINANYVDGYKQKNAYICTQG 501
           S +  N  KNRY +V  YDHSRV+L   +   P +DYINANY DGY++ NAY+ TQG
Sbjct: 694 SNMEVNKPKNRYANVTSYDHSRVILPPIERV-PGSDYINANYCDGYRKHNAYVATQG 749



 Score = 52.8 bits (121), Expect = 1e-08
 Identities = 30/94 (31%), Positives = 47/94 (50%)
 Frame = +1

Query: 220  SHIDIIMKSKPRARMRNVLMKVLDSGRVADRCANINFSRLPSNLAKNRYTDVLCYDHSRV 399
            +HI  +M+++P   +  + M+      V         + LP N  K R   +L Y+ SRV
Sbjct: 946  NHIQKLMQTEPHENITGMEMEFKKLSNVKADSTRFVTANLPCNKHKTRVPHILPYESSRV 1005

Query: 400  LLSQTDPDDPTTDYINANYVDGYKQKNAYICTQG 501
             L+     + + DYINA+ VDGY+ +  YI  QG
Sbjct: 1006 CLTPIRGVEGS-DYINASLVDGYRYRKRYIAAQG 1038


>AY745221-1|AAU93488.1|   95|Anopheles gambiae cytochrome P450
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 250 ACFS**CRCGNNLTLNFF*ICFFIALVGRRAYG 152
           ACF     CG+ + +     CF   +VG  A+G
Sbjct: 2   ACFDKYIDCGDPIDIKLLCQCFTCDVVGSCAFG 34


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 370 PCSGSWLGCSATWKN*CLHSGQRPD 296
           PC+ S LGC+ T +  C      PD
Sbjct: 6   PCAVSVLGCAYTQRTKCAACLDSPD 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,181
Number of Sequences: 2352
Number of extensions: 12941
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)