Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1676
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    28   0.27 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   0.63 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   1.4  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   1.4  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   2.5  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   5.8  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   7.7  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 309 CGT*VSTSYHGPSPGRYTSTELAPAVVTGFTS 214
           C + +S   HG  PGR TST L   V   F S
Sbjct: 571 CSSAISPKQHGFMPGRSTSTNLMSFVTNIFRS 602


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 420  WLTT-PSPXVVALDANNSARGSLYIDDGETYEYKNNKY 530
            WL+  P+P     ++N +  G+  IDD +TY+Y+   Y
Sbjct: 1039 WLSVLPTPIGAWQNSNYNYDGTDDIDDEDTYDYEQPDY 1076


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 191 ANRKRYALLVKPVTTAGASSVEVYLPG 271
           ANR     L +PVT AG   V  + PG
Sbjct: 423 ANRHSVVTLPQPVTAAGGGVVVPFTPG 449


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 301 RAAQRTPHHAAGHHLQDPGVPARRNHSAAPGARATLLRA 417
           RA    P   AG+  Q  GV  R+N +    AR  L+ A
Sbjct: 158 RAKGIVPQFTAGYSPQQNGVAERKNRTLVEMARCMLIDA 196


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 447 PPKVKGSSAISAEERRTRSRR 385
           PPK  G    SAEERR R ++
Sbjct: 460 PPKSYGKELESAEERREREQQ 480


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 104 PFFRAHSHIETKRREPWLY 160
           PF  A SHI+ KRR   ++
Sbjct: 176 PFLNADSHIKRKRRHRTIF 194


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 271 GRPVVRRGHLRAAQRTPHHAAGHHLQDP 354
           GRPV+   + + A   P+HA G H Q P
Sbjct: 108 GRPVL---YSQWAAGEPNHARGEHGQQP 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,731
Number of Sequences: 2352
Number of extensions: 12802
Number of successful extensions: 220
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)