Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1676
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 103 8e-23
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 103 8e-23
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 99 1e-21
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 28 6.0
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 28 6.0
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 103 bits (248), Expect = 8e-23
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +2
Query: 11 GNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRD 190
G F G+DVGGFF P+ +L++RWYQ AAFQPFFRAH+HI+T+RREPWL+ T +IR+
Sbjct: 600 GVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFFRAHAHIDTRRREPWLFSEQTQQIIRE 659
Query: 191 ANRKRYALL 217
A R RYALL
Sbjct: 660 ALRTRYALL 668
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Frame = +2
Query: 68 LMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRDANRKRYA---LLVKPVTTA 238
L TR+ + F+ H+ P Y L+ + ++ +L +PV
Sbjct: 661 LRTRYALLPYWYTLFQQHTENGVPPMRPLFYEFENDDLLLEEQKQWMVGSGILARPVVEK 720
Query: 239 GASSVEVYLP-GDGP---WYDVDTYVPHKGPRITQPVTISKIPVYQRGGTIVPRRERVRR 406
+V+V LP G+ W++ + +G I I+ P+YQRGGTI+P +R+RR
Sbjct: 721 DTFNVQVKLPRGEHKTERWFEWVSGNEVRGESIYVDAPITFTPIYQRGGTIIPTWQRIRR 780
Query: 407 SSALMADDPFT 439
S+ LM DDP T
Sbjct: 781 SATLMKDDPIT 791
Score = 42.3 bits (95), Expect = 3e-04
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +3
Query: 432 PSPXVVALDANNSARGSLYIDDGETYEYKNNKYIYAKIEF 551
P VALD+N ++ G +Y+DDG T++Y++ +++ A ++
Sbjct: 789 PITLFVALDSNENSNGEIYLDDGNTHDYQSGQFVKASFKY 828
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 103 bits (248), Expect = 8e-23
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +2
Query: 11 GNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRD 190
G F G+DVGGFF P+ +L++RWYQ AAFQPFFRAH+HI+T+RREPWL+ T +IR+
Sbjct: 614 GVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFFRAHAHIDTRRREPWLFSEQTQQIIRE 673
Query: 191 ANRKRYALL 217
A R RYALL
Sbjct: 674 ALRTRYALL 682
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Frame = +2
Query: 68 LMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRDANRKRYA---LLVKPVTTA 238
L TR+ + F+ H+ P Y L+ + ++ +L +PV
Sbjct: 675 LRTRYALLPYWYTLFQQHTENGVPPMRPLFYEFENDDLLLEEQKQWMVGSGILARPVVEK 734
Query: 239 GASSVEVYLP-GDGP---WYDVDTYVPHKGPRITQPVTISKIPVYQRGGTIVPRRERVRR 406
+V+V LP G+ W++ + +G I I+ P+YQRGGTI+P +R+RR
Sbjct: 735 DTFNVQVKLPRGEHKTERWFEWVSGNEVRGESIYVDAPITFTPIYQRGGTIIPTWQRIRR 794
Query: 407 SSALMADDPFT 439
S+ LM DDP T
Sbjct: 795 SATLMKDDPIT 805
Score = 42.3 bits (95), Expect = 3e-04
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +3
Query: 432 PSPXVVALDANNSARGSLYIDDGETYEYKNNKYIYAKIEF 551
P VALD+N ++ G +Y+DDG T++Y++ +++ A ++
Sbjct: 803 PITLFVALDSNENSNGEIYLDDGNTHDYQSGQFVKASFKY 842
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 99 bits (238), Expect = 1e-21
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +2
Query: 11 GNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRD 190
G F G+DVGGFF P+ EL+ RWYQA AFQPFFR HSH +TKRREPWL+ TT IR+
Sbjct: 592 GLPFVGADVGGFFGNPDEELLVRWYQAGAFQPFFRGHSHQDTKRREPWLFADNTTEAIRN 651
Query: 191 ANRKRYALL 217
A + RYA L
Sbjct: 652 AIKTRYAFL 660
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +2
Query: 212 LLVKPVTTAGASSVEVYLPGDGP-WYDVDTYVPHKGPRITQ-PVTISKIPVYQRGGTIVP 385
LLVKPV + +YLPG WYD +T+ P Q P ++ I +Y RGGTI+P
Sbjct: 704 LLVKPVLEEKVKELSIYLPGKRQVWYDWETHKARPSPGAVQIPAELNTIGLYHRGGTIIP 763
Query: 386 RRERVRRSSALMADDP 433
+ V+ ++ + P
Sbjct: 764 KLSEVKLTTKENHEQP 779
Score = 31.5 bits (68), Expect = 0.49
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 471 ARGSLYIDDGETYEYKNNKYIY 536
A G++Y+DDGE+Y Y+ + Y
Sbjct: 793 ANGTIYLDDGESYAYEKGDFAY 814
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +2
Query: 11 GNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRD 190
G + GSDV GF EL RW Q AF FFR H+ I ++P ++P+ A +
Sbjct: 609 GIPYVGSDVCGFIGTTTEELCLRWQQMGAFHSFFRNHNTIGAPAQDPAVWPSVAAA-TKK 667
Query: 191 ANRKRYALL 217
AN RY L
Sbjct: 668 ANLFRYQYL 676
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 212 LLVKPVTTAGASSVEVYLPGDGPWYDVDTY----VPHKGPRITQPVTISKIPVYQRGGTI 379
+LV PV G +SV YLP D WY + Y + G T S+IPV+ RG ++
Sbjct: 720 ILVAPVIYQGTTSVNAYLPTDR-WYSLFDYRYGSIMSPGYATVPAPTTSRIPVFVRGYSV 778
Query: 380 VPRR 391
+PR+
Sbjct: 779 IPRQ 782
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 426 TTPSPXVVALDANNSARGSLYIDDGETYEYKNNKYIYAKIEF 551
+ P ++A G+LY DDGET N Y Y + +F
Sbjct: 793 SNPFELLIAPCPLGMGEGTLYWDDGETIVNDFNSYDYHQFDF 834
>Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical
protein F53F4.8 protein.
Length = 856
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 11 GNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRD 190
G + GSDV GF EL RW Q AF FFR H+ + ++P ++P+ A +
Sbjct: 542 GIPYVGSDVCGFLGTSNEELCLRWQQMGAFHSFFRNHNTLGEPAQDPAVWPSVAAA-TKI 600
Query: 191 ANRKRYALL 217
AN RY L
Sbjct: 601 ANLFRYQYL 609
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Frame = +2
Query: 212 LLVKPVTTAGASSVEVYLPGDGPWYDVDTYVPHKGPRI-----TQPV-TISKIPVYQRGG 373
+LV PV GA S +YLP D WY + Y+ G RI T P T S+IPV+ RGG
Sbjct: 653 ILVAPVVYQGAVSTSLYLPND-VWYSLFNYM--YGSRIDPGFITVPSPTTSRIPVFVRGG 709
Query: 374 TIVPRR 391
++PR+
Sbjct: 710 YVIPRQ 715
>U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical
protein D2096.3 protein.
Length = 936
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 11 GNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTA 178
G + GSD+ GF EL RW+Q AF PF R H+ ++P ++P+ A
Sbjct: 614 GVPYVGSDICGFNGVSNEELCLRWHQFGAFSPFSRDHNSEGMPDQDPAVWPSVANA 669
Score = 35.1 bits (77), Expect = 0.040
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 209 ALLVKPVTTAGASSVEVYLPGDGPWYDV--DTYVPH--KGPRITQPVTISKIPVYQRGGT 376
AL++ P G +SV Y P D WY + +TY G S PV+ RGG
Sbjct: 724 ALMIAPALYQGQTSVHAYFPSD-TWYSLQPETYGQKMFSGFNDVNAPLSSLTPVFVRGGF 782
Query: 377 IVPRR 391
++PR+
Sbjct: 783 VLPRQ 787
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 160 PGRHHRAHPGRQPQEIR 210
PG+HH HPG P E R
Sbjct: 80 PGQHHPQHPGMPPMEWR 96
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 125 HIETKRREPWLYPAATTALIRDANRKRYALLVKPVTTAGASSV--EVYLPGDGPWYDVDT 298
HIETK +EP P T LI +A + T GA+++ +V L D P VDT
Sbjct: 263 HIETKAKEPENVPTEMTKLIGEA--------AETAETDGAANLGYDVVLTTDPP---VDT 311
Query: 299 YVPHKGPRITQPVTISK 349
V H P I + + +++
Sbjct: 312 -VTHPDPPIEEIIKLAE 327
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 125 HIETKRREPWLYPAATTALIRDANRKRYALLVKPVTTAGASSV--EVYLPGDGPWYDVDT 298
HIETK +EP P T LI +A + T GA+++ +V L D P VDT
Sbjct: 263 HIETKAKEPENVPTEMTKLIGEA--------AETAETDGAANLGYDVVLTTDPP---VDT 311
Query: 299 YVPHKGPRITQPVTISK 349
V H P I + + +++
Sbjct: 312 -VTHPDPPIEEIIKLAE 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,944,717
Number of Sequences: 27780
Number of extensions: 256665
Number of successful extensions: 785
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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