Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1673
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    55   2e-09
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     50   8e-08
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    28   0.39 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.6  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   3.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   4.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   6.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   6.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.3  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
 Frame = -2

Query: 739 ESKVTRHTKSPLGHISSXTSRLKHVHIDIIGXLPSCS--GFQYCLTAVDRYTRWPEVWPM 566
           E K+ R    P+    + T  L  VH DI G + + +  G +Y LT +D ++R+  V+ +
Sbjct: 54  EGKIARKPFPPITERQT-TRVLDLVHTDICGPMNTVTSGGSRYFLTMIDDFSRYTTVYFL 112

Query: 565 HGIT-AEEVASTFVAGWIARFGV-PAVITTDQGRQFESDLFRRLTNLCGTKRIRTTSYHP 392
              + A EV   +V     RFG  P VI +DQG +++S    +     G     T  Y P
Sbjct: 113 KRKSEAAEVIEEYVTMVHNRFGRNPIVIRSDQGGEYKSKRLGQFYRAKGIVPQFTAGYSP 172

Query: 391 CANGLVERMHRQL--KASLMCYDDS-----WLNALPLVLLGMRSAFKEDLQATVAELLYG 233
             NG+ ER +R L   A  M  D       W  A+   +     +    ++ T  EL YG
Sbjct: 173 QQNGVAERKNRTLVEMARCMLIDAKLGYRFWAEAINAAVYLQNISSSRSIEKTPFELWYG 232

Query: 232 E 230
           +
Sbjct: 233 K 233


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 50.0 bits (114), Expect = 8e-08
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = -2

Query: 739 ESKVTRHTKSPLGHISSXTSRLKHVHIDIIGXLPSCS--GFQYCLTAVDRYTRWPEVWPM 566
           E K+ R    P+   +S T  L  +H D+ G +   +  G +Y +T +D ++R+  V+ +
Sbjct: 319 ECKMARSPFPPVAGKTS-TEVLDIIHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFVYFL 377

Query: 565 HGIT-AEEVASTFVAGWIARFG-VPAVITTDQGRQFESDLFRRLTNLCGTKRIRTTSYHP 392
              + AE+    +V     +FG  P +I +DQG ++ +   R+     G K   T +Y P
Sbjct: 378 KKKSEAEDKIHEYVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADEGIKMEFTAAYSP 437

Query: 391 CANGLVERMHRQLKASLMC 335
             NG+ ER +R L     C
Sbjct: 438 QQNGVAERKNRSLTEMGRC 456


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 0.39
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 164 IRRVLEARRTGRY*QFPWKR*CFSVKQFRYCC 259
           ++R +       Y +FPW    F + + RYCC
Sbjct: 331 VQRTINEDFRAEYGEFPWMVALFQLPEQRYCC 362


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 235 GETLTLPGELLVPPSPSGFEDP 170
           GET  LP +   PP P GF  P
Sbjct: 705 GETPQLPPQRKGPPGPPGFNGP 726


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 69  ERFLNMKGDGLVC 107
           E FLNMK D +VC
Sbjct: 285 EHFLNMKDDSIVC 297


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +2

Query: 488 DDSRYSESSNP---TSYKGARHFFCCYS 562
           +D + S SSN    T+    RHFFCC S
Sbjct: 120 NDDQESCSSNECVSTTETPTRHFFCCCS 147


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 247 ELLYGETLTLPGELLVPPSPSGFEDP 170
           ELL  ET +    L  PPS SG E P
Sbjct: 723 ELLMYETSSTTTTLTPPPSESGRETP 748


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 13/67 (19%), Positives = 31/67 (46%)
 Frame = -2

Query: 217  PGELLVPPSPSGFEDPTDFVVKLRQRMSKLRPTPCSSHTKPSPFIFKNLSTASHVMLRED 38
            PG + +   P+  ++P ++++   Q ++ L       HT P P     + T  H  ++  
Sbjct: 1233 PGYMDLIGVPASVDNP-EYLMGSTQAIAGLAQGSMGPHTPPPPNTPNGMPTHQHSQIQLQ 1291

Query: 37   SVRRSMQ 17
             +++ +Q
Sbjct: 1292 PIQQPLQ 1298


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 126 VPLHVPHTLSHHLSYSKIFPP 64
           +P H  + L H +SY  +F P
Sbjct: 499 LPHHTHYQLHHQMSYHNMFTP 519


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 126 VPLHVPHTLSHHLSYSKIFPP 64
           +P H  + L H +SY  +F P
Sbjct: 475 LPHHTHYQLHHQMSYHNMFTP 495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,143
Number of Sequences: 2352
Number of extensions: 18096
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)