Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1671
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 189 2e-48
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 183 1e-46
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 174 5e-44
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 137 5e-43
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 8e-08
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.29
05_01_0297 - 2314687-2316021 32 0.38
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 32 0.38
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.2
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 31 1.2
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 29 2.7
11_06_0437 - 23533218-23536382 29 4.7
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 4.7
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 29 4.7
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 4.7
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 28 6.2
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 8.2
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 28 8.2
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 28 8.2
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 189 bits (461), Expect = 2e-48
Identities = 83/148 (56%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 285
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 286 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP- 462
VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P
Sbjct: 61 FVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPT 120
Query: 463 DGDLGTQLRTDF-DSGKELLCTVLKSCG 543
D L Q++ F + GK+++ TV+ + G
Sbjct: 121 DDTLTNQIKNGFGEEGKDMILTVMSAMG 148
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 183 bits (446), Expect = 1e-46
Identities = 83/151 (54%), Positives = 114/151 (75%), Gaps = 6/151 (3%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGH 273
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGH
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73
Query: 274 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDL 453
AK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL
Sbjct: 74 AKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDL 133
Query: 454 KIP-DGDLGTQLRTDFDSGKELLCTVLKSCG 543
++P D L Q++T F GK+L+ TV+ + G
Sbjct: 134 RLPTDDSLLGQIKTGFGEGKDLVVTVMSAMG 164
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 174 bits (424), Expect = 5e-44
Identities = 84/160 (52%), Positives = 112/160 (70%), Gaps = 15/160 (9%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMS 246
M D E+ HFE+ D+GAS T+P Q +RKNG +++K RPCK +VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382
Query: 247 TSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMA 426
TSKTGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+
Sbjct: 1383 TSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT 1442
Query: 427 DNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCG 543
++G ++DL++P D L TQ++ F GK+L+ TV+ + G
Sbjct: 1443 ESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMG 1482
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 137 bits (332), Expect(2) = 5e-43
Identities = 60/106 (56%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +1
Query: 229 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 408
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 409 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCG 543
+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + G
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMG 179
Score = 55.2 bits (127), Expect(2) = 5e-43
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 231
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 361 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 534
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 535 SCG 543
+ G
Sbjct: 106 AMG 108
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 149 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 262
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>05_01_0297 - 2314687-2316021
Length = 444
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +1
Query: 385 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGGGV 552
+ D + +G L + AD D+R + DGD G +LR F S +LL V + GGGV
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDV-EGSGGGV 144
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 122 KTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLI 301
K + + P TP P PP P P ++ + P K T T+ +W L
Sbjct: 277 KLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETV--SWDSLP 334
Query: 302 SSMVKSMKI 328
+S++KS+K+
Sbjct: 335 TSLIKSVKV 343
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 352 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 471
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 110 WVTSKTHTSRPETPGPQPPSPCNV 181
W+T T P+ P P PP PC+V
Sbjct: 52 WLTWPPPTPLPDAPPPPPPHPCDV 75
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 94 IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 246
+Q ++ D E H T +ATFPM L N + +GR CK V +S
Sbjct: 431 VQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 271 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 408
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 460 PDGDLGTQLRTDFDSGKELLCTVLKSCG 543
PDGDL ++R +SGKEL L G
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIG 233
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 125 THTSRPETPGPQPPSPCNVRP-CVKTVSLC*RVVHARLLKCPHP 253
T PE P PP C + P C C ++ +LL+ HP
Sbjct: 3 TAKQAPENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = -2
Query: 540 AGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFALHV 361
AG H ++ FLA ++ T + +E +++ VL+ +T ++ V D L V V
Sbjct: 1038 AGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV----V 1088
Query: 360 GYVHVVCGGTDIFILFTIEDINPNQVNFSVA 268
G+ V+ G +++ DI+ N SVA
Sbjct: 1089 GFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 375 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAW 223
F L GY+ + GT++F F + NP+ + ++ G C F+ LA+
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLAY 114
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 211 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 330
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 142 GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 300
G SG+ + + SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 543 GTSGSKCS--LWLSAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +1
Query: 325 DICPSTHNMD---VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 495
D CP T D V++ + TD +M G + GDLG+ RTD
Sbjct: 233 DQCPGTSATDSTGATCVQQAEKVSTDSDQVAKAAMMTAEGAMNFMRSTISGDLGSFPRTD 292
Query: 496 FDSGKE 513
SGKE
Sbjct: 293 AASGKE 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,087,841
Number of Sequences: 37544
Number of extensions: 430566
Number of successful extensions: 1580
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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