Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1668
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 4.0
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 4.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 5.3
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 7.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.3
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = +1
Query: 331 TWFPSHVSTSSCQVSLPSHPVEADSTV 411
+W P + SSC++++ P + S +
Sbjct: 147 SWKPPAIYKSSCEINVEYFPFDEQSCI 173
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 147 FQLAGELRESHCM 109
F G +RESHCM
Sbjct: 68 FGCCGAIRESHCM 80
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G++H
Sbjct: 167 RFRPPLNPRFGLAH 180
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G++H
Sbjct: 177 RFRPPLNPRFGLAH 190
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 47 QNHEHILSSPLAQSIRHCRRTIQCDSLSSPAS*KHRRNLLHRQRG 181
Q H+ +++SPL+Q + + +L SP R+ R+RG
Sbjct: 230 QQHQGVVTSPLSQQQQAAPQGAASANLPSPLY-PWMRSQFERKRG 273
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 383 EGSETWHEEVETWEGNHVYGQFSEISVQLTGEPKASGNT 267
+GS T H E+E H+ ++ V + P+ S +T
Sbjct: 47 QGSRTTHNELEKNRRAHLRNCLEKLKVLVPLGPETSRHT 85
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = +1
Query: 307 LISENWP*TWFPSHVSTSSCQVSLPSHPVEADSTV 411
LI N W P + SSC + + P + + +
Sbjct: 132 LIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCI 166
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G +H
Sbjct: 394 RFRPSLNPRFGSTH 407
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G +H
Sbjct: 394 RFRPSLNPRFGSTH 407
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G +H
Sbjct: 394 RFRPSLNPRFGSTH 407
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G +H
Sbjct: 394 RFRPSLNPRFGSTH 407
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 664 RWRPILRPRGGMSH 623
R+RP L PR G +H
Sbjct: 383 RFRPSLNPRFGSTH 396
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,338
Number of Sequences: 438
Number of extensions: 4676
Number of successful extensions: 58
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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