Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1666
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA...    31   1.3  
AY070873-1|AAL48495.1|   92|Drosophila melanogaster LD06106p pro...    31   2.3  
AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG...    29   9.1  

>AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA
            protein.
          Length = 2002

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = -1

Query: 175  NNLVRARSVPGSLPLGEVRWGPLAASTPQLFVGSHLNSSVSRQQQMRDESISKGXP 8
            N LVR R  P   PLG  +   +  ST +LF+   LN    +  ++R E+  +G P
Sbjct: 1359 NALVRYRLKPD--PLGSYKMFEVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLP 1412


>AY070873-1|AAL48495.1|   92|Drosophila melanogaster LD06106p
           protein.
          Length = 92

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 18  FDIDSSRICCCRDTELLRCDPTNS*GVDAANGPQR-TSPRGRE 143
           F+  SS  CCC  T  +RC  ++S  +  ++   R  S R RE
Sbjct: 50  FNSSSSNSCCCPTTSAMRCSSSSSNNISNSSSKGRGNSARRRE 92


>AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG,
           isoform G protein.
          Length = 1063

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 6/32 (18%)
 Frame = -2

Query: 630 VNGGRLLCSHEYNKVYRD------ARPPQRGP 553
           VN  +LLC  +++ +YRD       RPP+RGP
Sbjct: 290 VNRCKLLCCKDFDILYRDCTTARPGRPPKRGP 321


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,064,921
Number of Sequences: 53049
Number of extensions: 755883
Number of successful extensions: 2058
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)