Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1660
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 93 1e-18
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 93 1e-18
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 93 1e-18
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 93 1e-18
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 93 1e-18
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 93 1e-18
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 93 1e-18
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 48 5e-05
U20530-1|AAA87905.1| 211|Homo sapiens spp-24 precursor protein. 31 5.8
BC112438-1|AAI12439.1| 211|Homo sapiens secreted phosphoprotein... 31 5.8
BC106705-1|AAI06706.1| 211|Homo sapiens SPP2 protein protein. 31 5.8
BC069401-1|AAH69401.1| 211|Homo sapiens secreted phosphoprotein... 31 5.8
BC028740-1|AAH28740.1| 525|Homo sapiens signal transducing adap... 31 5.8
AJ308099-1|CAC87050.1| 211|Homo sapiens secreted phosphoprotein... 31 5.8
AJ272265-1|CAB75571.1| 211|Homo sapiens secreted phosphoprotein... 31 5.8
AF042274-1|AAC63964.1| 342|Homo sapiens signal transducing adap... 31 5.8
AF042273-1|AAC63963.1| 525|Homo sapiens signal transducing adap... 31 5.8
AC079790-2|AAY14712.1| 525|Homo sapiens unknown protein. 31 5.8
AC006037-1|AAX93090.1| 211|Homo sapiens unknown protein. 31 5.8
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 EVXHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 245
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 246 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKY 422
+ DG IEG A + + AKL V KF ILATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 423 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 566
+ H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 47.6 bits (108), Expect = 5e-05
Identities = 32/84 (38%), Positives = 41/84 (48%)
Frame = +3
Query: 315 AKLTVTFKFGEISRDGSVQILATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA 494
AKL V KF ILATDY NYA+ Y+C + H F WIL+RN L +
Sbjct: 12 AKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPET 68
Query: 495 KTAVDNFIKEHSKEIDSSKLVHTD 566
++ N + S ID K+ TD
Sbjct: 69 VDSLKNILT--SNNIDVKKMTVTD 90
>U20530-1|AAA87905.1| 211|Homo sapiens spp-24 precursor protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
>BC112438-1|AAI12439.1| 211|Homo sapiens secreted phosphoprotein 2,
24kDa protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
>BC106705-1|AAI06706.1| 211|Homo sapiens SPP2 protein protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
>BC069401-1|AAH69401.1| 211|Homo sapiens secreted phosphoprotein 2,
24kDa protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
>BC028740-1|AAH28740.1| 525|Homo sapiens signal transducing adaptor
molecule (SH3 domain and ITAM motif) 2 protein.
Length = 525
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 519 KEHSKEIDSSKLVHTDFSEEACKFTSSSVITRTRENIKTEKILGSXAGNQT 671
K H K + K + ++SEE K S+I+ T +++K E I AG+QT
Sbjct: 100 KAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQT 150
>AJ308099-1|CAC87050.1| 211|Homo sapiens secreted phosphoprotein 24
protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
>AJ272265-1|CAB75571.1| 211|Homo sapiens secreted phosphoprotein 24
precursor protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
>AF042274-1|AAC63964.1| 342|Homo sapiens signal transducing adaptor
molecule 2B protein.
Length = 342
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 519 KEHSKEIDSSKLVHTDFSEEACKFTSSSVITRTRENIKTEKILGSXAGNQT 671
K H K + K + ++SEE K S+I+ T +++K E I AG+QT
Sbjct: 100 KAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQT 150
>AF042273-1|AAC63963.1| 525|Homo sapiens signal transducing adaptor
molecule 2A protein.
Length = 525
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 519 KEHSKEIDSSKLVHTDFSEEACKFTSSSVITRTRENIKTEKILGSXAGNQT 671
K H K + K + ++SEE K S+I+ T +++K E I AG+QT
Sbjct: 100 KAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQT 150
>AC079790-2|AAY14712.1| 525|Homo sapiens unknown protein.
Length = 525
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 519 KEHSKEIDSSKLVHTDFSEEACKFTSSSVITRTRENIKTEKILGSXAGNQT 671
K H K + K + ++SEE K S+I+ T +++K E I AG+QT
Sbjct: 100 KAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQT 150
>AC006037-1|AAX93090.1| 211|Homo sapiens unknown protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 566 IGMHKFRRVYLFGVLLDEIIDSSF 495
+G HK+R YLFG++ DE I F
Sbjct: 155 LGSHKWRNNYLFGLISDESISEQF 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,572,281
Number of Sequences: 237096
Number of extensions: 1693194
Number of successful extensions: 4294
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4279
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -