Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1659
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 380 e-106
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 380 e-106
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 222 8e-84
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 282 2e-76
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 218 3e-57
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 218 3e-57
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 199 2e-51
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 114 5e-26
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 89 2e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 89 2e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 88 7e-18
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 88 7e-18
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 88 7e-18
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 52 5e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 6e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 45 6e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 40 0.001
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.26
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.26
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.45
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 30 1.4
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.4
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 4.2
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 4.2
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.2
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.4
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 380 bits (936), Expect = e-106
Identities = 181/223 (81%), Positives = 194/223 (86%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 386
KAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 387 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
EAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGY
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGY 183
Query: 567 NPAAVAFVPISGWHGDNMLEPSTKMPWXXGMAXGA*GRQADGK 695
NP AV FVPISG++GDNMLE S+ MPW G A A GK
Sbjct: 184 NPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGK 226
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 380 bits (936), Expect = e-106
Identities = 181/223 (81%), Positives = 194/223 (86%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 386
KAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 387 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
EAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGY
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGY 183
Query: 567 NPAAVAFVPISGWHGDNMLEPSTKMPWXXGMAXGA*GRQADGK 695
NP AV FVPISG++GDNMLE S+ MPW G A A GK
Sbjct: 184 NPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGK 226
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 222 bits (542), Expect(2) = 8e-84
Identities = 101/114 (88%), Positives = 109/114 (95%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 368
KAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 106 bits (255), Expect(2) = 8e-84
Identities = 51/79 (64%), Positives = 57/79 (72%)
Frame = +3
Query: 459 LIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 638
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 639 MPWXXGMAXGA*GRQADGK 695
MPW G A A GK
Sbjct: 174 MPWFKGWAVERKEGNASGK 192
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 282 bits (691), Expect = 2e-76
Identities = 136/169 (80%), Positives = 148/169 (87%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 386
KAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 387 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKK 533
EAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 523 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSXGWXVERKEGKLTE 693
+S + P +SRR T Q L D TETTC C GS + ++ L E
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPE 208
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 218 bits (533), Expect = 3e-57
Identities = 106/207 (51%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
Frame = +3
Query: 39 LTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAER 218
+ L +GHVD+GKST GHL++ +D RTI+KF EA GK SF YAWVLD+ + ER
Sbjct: 171 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 230
Query: 219 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 398
ERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 231 ERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGF 290
Query: 399 SKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPA 575
GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 291 ENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP 348
Query: 576 AVAFVPISGWHGDNMLEPSTKMPWXXG 656
FVP+SG+ G+N+++ ++ W G
Sbjct: 349 --KFVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 218 bits (533), Expect = 3e-57
Identities = 106/207 (51%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
Frame = +3
Query: 39 LTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAER 218
+ L +GHVD+GKST GHL++ +D RTI+KF EA GK SF YAWVLD+ + ER
Sbjct: 189 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 248
Query: 219 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 398
ERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 249 ERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGF 308
Query: 399 SKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPA 575
GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 309 ENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP 366
Query: 576 AVAFVPISGWHGDNMLEPSTKMPWXXG 656
FVP+SG+ G+N+++ ++ W G
Sbjct: 367 --KFVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 199 bits (485), Expect = 2e-51
Identities = 88/187 (47%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
+GHVD+GKST G L++ G +DKRT+EK+ +EA+E G+ S+ +W +D ERE+G T
Sbjct: 115 VGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKT 174
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 413
+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQ
Sbjct: 175 VEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQ 234
Query: 414 TREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFV 590
TREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +V
Sbjct: 235 TREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYV 294
Query: 591 PISGWHG 611
P SG G
Sbjct: 295 PCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 114 bits (275), Expect = 5e-26
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAER 218
K +
Sbjct: 64 KVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 89.4 bits (212), Expect = 2e-18
Identities = 63/187 (33%), Positives = 94/187 (50%)
Frame = +3
Query: 30 RLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLK 209
++ + + IGH+D GK+T T + K+ K K + +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIKFDE------------IDKGK 87
Query: 210 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 389
E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 390 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 569
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Query: 570 PAAVAFV 590
A +
Sbjct: 197 GDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 89.4 bits (212), Expect = 2e-18
Identities = 63/187 (33%), Positives = 94/187 (50%)
Frame = +3
Query: 30 RLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLK 209
++ + + IGH+D GK+T T + K+ K K + +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIKFDE------------IDKGK 87
Query: 210 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 389
E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 390 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 569
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Query: 570 PAAVAFV 590
A +
Sbjct: 197 GDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 87.8 bits (208), Expect = 7e-18
Identities = 66/173 (38%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
IGHVD GK+T T I K A G KY + D E+ RGIT
Sbjct: 55 IGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DNAPEEKARGIT 99
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 413
I+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Q
Sbjct: 100 INAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------Q 152
Query: 414 TREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
TREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 TREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 87.8 bits (208), Expect = 7e-18
Identities = 66/173 (38%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
IGHVD GK+T T I K A G KY + D E+ RGIT
Sbjct: 56 IGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DNAPEEKARGIT 100
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 413
I+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Q
Sbjct: 101 INAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------Q 153
Query: 414 TREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
TREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 154 TREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 87.8 bits (208), Expect = 7e-18
Identities = 66/173 (38%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
IGHVD GK+T T I K A G KY + D E+ RGIT
Sbjct: 56 IGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DNAPEEKARGIT 100
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 413
I+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Q
Sbjct: 101 INAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------Q 153
Query: 414 TREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
TREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 154 TREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 57.6 bits (133), Expect = 8e-09
Identities = 46/144 (31%), Positives = 64/144 (44%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
+ HVD GKST L+ CG + Q+ +LDKL+ ERERGIT
Sbjct: 48 VAHVDHGKSTLADRLLEMCGAVPP---------GQKQ---------MLDKLQVERERGIT 89
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 413
+ Y + +ID PGH DF + + D +L+VAA G Q
Sbjct: 90 VKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQ 142
Query: 414 TREHALLAFTLGVKQLIVXVNKMD 485
T + LAF + Q+I +NK+D
Sbjct: 143 TIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 53.6 bits (123), Expect = 1e-07
Identities = 45/142 (31%), Positives = 62/142 (43%)
Frame = +3
Query: 60 HVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGITID 239
H+DSGK+T T ++Y G ID E+ +G +D + ER+RGITI
Sbjct: 52 HIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQRGITIQ 101
Query: 240 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 419
A + + IID PGH DF + D AVL++ G G G+ T
Sbjct: 102 SAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTV 156
Query: 420 EHALLAFTLGVKQLIVXVNKMD 485
L + + I VNKMD
Sbjct: 157 NRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/109 (33%), Positives = 50/109 (45%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
I HVD+GK+T T L+Y G I A + KG+ V D L ERERGIT
Sbjct: 31 IAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERERGIT 77
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 380
+ A + + + +ID PGH DF + D V+++ G
Sbjct: 78 VQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 43.6 bits (98), Expect(2) = 6e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 165 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 341
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 342 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMD 485
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 20.6 bits (41), Expect(2) = 6e-05
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 54 IGHVDSGKST 83
+GHVD GK+T
Sbjct: 162 MGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +3
Query: 276 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 455
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 456 QLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 626
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKFX---KEAQE----MGKGSF 179
KR + I HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 16 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAI 75
Query: 180 KYAWVLDKLKAERERGI----TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 347
+ L+K E +G T+++ K + + + + +ID+PGH DF + D
Sbjct: 76 SLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTD 135
Query: 348 CAVLIVAAGTG 380
A+++V +G
Sbjct: 136 GALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKFX---KEAQE----MGKGSF 179
KR + I HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 16 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAI 75
Query: 180 KYAWVLDKLKAERERGI----TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 347
+ L+K E +G T+++ K + + + + +ID+PGH DF + D
Sbjct: 76 SLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTD 135
Query: 348 CAVLIVAAGTG 380
A+++V +G
Sbjct: 136 GALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 273 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 452
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 453 KQLIVXVNKMDSTEPPYSEPRFEEI 527
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/104 (25%), Positives = 45/104 (43%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
+ HVD GK++ L+ I R G +Y +D + E+ RGIT
Sbjct: 26 VAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSREDEQTRGIT 70
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 365
+ + + +ID+PGH DF + + +D A+L++
Sbjct: 71 MKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/104 (25%), Positives = 45/104 (43%)
Frame = +3
Query: 54 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKLKAERERGIT 233
+ HVD GK++ L+ I R G +Y +D + E+ RGIT
Sbjct: 26 VAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSREDEQTRGIT 70
Query: 234 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 365
+ + + +ID+PGH DF + + +D A+L++
Sbjct: 71 MKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 198 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 362
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 363 VAAGTG 380
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 198 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 362
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 363 VAAGTG 380
V A G
Sbjct: 107 VDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 282 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 461
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 462 IVXVNKMDSTEPPYSEPR 515
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1
Query: 478 LFTXTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 350
LF T+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 541 PHTSRRLATTQLLSLSCPFLD 603
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 541 PHTSRRLATTQLLSLSCPFLD 603
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 541 PHTSRRLATTQLLSLSCPFLD 603
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 541 PHTSRRLATTQLLSLSCPFLD 603
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 28.7 bits (61), Expect = 4.2
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +3
Query: 306 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVXV 473
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 474 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 608
D EP P EP +EEI + Y + + P + PI H
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 558
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 28.7 bits (61), Expect = 4.2
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +3
Query: 306 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVXV 473
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 474 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 608
D EP P EP +EEI + Y + + P + PI H
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 583
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 461 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 303
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 302 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 183
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 276 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 371
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,590,482
Number of Sequences: 27780
Number of extensions: 354983
Number of successful extensions: 1061
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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