Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1659
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 416 e-119
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 405 e-115
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 321 3e-90
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 288 3e-80
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 37 2e-04
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 2.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 3.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 416 bits (1025), Expect = e-119
Identities = 197/224 (87%), Positives = 205/224 (91%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 386
KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF
Sbjct: 64 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 123
Query: 387 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
EAGISKNGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE RFEEIKKEVSSYIKKIGY
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 183
Query: 567 NPAAVAFVPISGWHGDNMLEPSTKMPWXXGMAXGA*GRQADGKC 698
NPAAVAFVPISGWHGDNMLE S+KMPW G + +GKC
Sbjct: 184 NPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKC 227
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 405 bits (996), Expect = e-115
Identities = 192/223 (86%), Positives = 200/223 (89%)
Frame = +3
Query: 27 KRLTLTLYGIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFXKEAQEMGKGSFKYAWVLDKL 206
+++ + + IGHVDSGKSTTTGHLIYKCGGIDKRTIEKF KEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 207 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 386
KAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEF 123
Query: 387 EAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 566
EAGISKNGQTREHALLAFTLGVKQLIV VNKMD T+PPYSE RFEEIKKEVSSYIKKIGY
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGY 183
Query: 567 NPAAVAFVPISGWHGDNMLEPSTKMPWXXGMAXGA*GRQADGK 695
N A+VAFVPISGWHGDNMLEPS K PW G ADGK
Sbjct: 184 NTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGK 226
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 321 bits (789), Expect = 3e-90
Identities = 153/170 (90%), Positives = 156/170 (91%)
Frame = +3
Query: 189 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 368
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 369 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSY 548
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 549 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWXXGMAXGA*GRQADGKC 698
IKKIGYNPAAVAFVPISGWHGDNMLE S+KMPW G + +GKC
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKC 170
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 288 bits (707), Expect = 3e-80
Identities = 137/154 (88%), Positives = 140/154 (90%)
Frame = +3
Query: 237 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 416
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 417 REHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 596
REHALLAFTLGVKQLIV VNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 597 SGWHGDNMLEPSTKMPWXXGMAXGA*GRQADGKC 698
SGWHGDNMLE S+KMPW G + +GKC
Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKC 154
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 37.1 bits (82), Expect = 2e-04
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = +3
Query: 276 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 455
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 456 QLIVXVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 626
+IV +NK+D + ++E K + I+++G + V IS G N+ E
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRE 298
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 82 VDLPESTCPMPYNVNVSLFP 23
+DLP TC P+N L P
Sbjct: 132 IDLPWRTCGNPWNTRYCLTP 151
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 82 VDLPESTCPMPYNVNVSLFP 23
+DLP TC P+N L P
Sbjct: 185 IDLPWRTCGNPWNTRYCLTP 204
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 18 GQGKRLTLTLYGIGHVDSG 74
GQG+ +T ++ G+G V++G
Sbjct: 739 GQGQDMTYSVQGVGVVNAG 757
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 261 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 362
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 261 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 362
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 6 LTKNGQGKRLTLTLYGIGHVDSGKST 83
L++ ++ T+ + IGHV GKST
Sbjct: 32 LSREVISRQATINIGTIGHVAHGKST 57
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 638 FG*RLQHVVSVPSRNGHESDSSWV 567
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 481 WIPLNHHTVSPDLRKSRRKY 540
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 462 IVXVNKMDSTEPPYSEPRFEEIKKEVS 542
++ N + Y E R+EEI+++ S
Sbjct: 4 LILENMSEYIRQVYGEDRWEEIRRQAS 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,401
Number of Sequences: 438
Number of extensions: 4364
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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