BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1658
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 137 4e-32
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 137 4e-32
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 137 4e-32
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 137 4e-32
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 137 4e-32
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 137 4e-32
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 137 4e-32
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 137 4e-32
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 137 4e-32
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 137 4e-32
BC061631-1|AAH61631.1| 1686|Homo sapiens ADAM metallopeptidase w... 30 6.9
AY327122-1|AAQ94616.1| 1686|Homo sapiens COMPase precursor protein. 30 6.9
AF140675-1|AAD56358.1| 997|Homo sapiens zinc metalloprotease AD... 30 6.9
AB209497-1|BAD92734.1| 527|Homo sapiens a disintegrin and metal... 30 6.9
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 52 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 111
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 112 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 170
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 16 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 50
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 24 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 83
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 84 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 142
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -2
Query: 606 KKVWWDPNEINEIANXNSRQNI 541
KKVW DPNE NEIAN NSRQ I
Sbjct: 1 KKVWLDPNETNEIANANSRQQI 22
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 137 bits (331), Expect = 4e-32
Identities = 66/119 (55%), Positives = 80/119 (67%)
Frame = -3
Query: 536 KMIKXGLVIKKPVAVHSXARVRKNTXARRKGRHCGFGKRRGXANAXMPQKELWVQXQXXX 357
K+IK GL+I+KPV VHS AR RKNT ARRKGRH G GKR+G ANA MP+K W++
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 356 XXXXXXXXXXXXXXRHXXHSLYMKAKGNVFKXKRVLMEYIXRKKXEKARTKMLSDQXEA 180
RH HSLY+K KGNVFK KR+LME+I + K +KAR K+L+DQ EA
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA 161
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 645 RRGLQPXVMRCGKKKVWWDPNEINEIANXNSRQNI 541
++ L V+RCGKKKVW DPNE NEIAN NSRQ I
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQI 41
>BC061631-1|AAH61631.1| 1686|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 7 protein.
Length = 1686
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 568 DLIDFIWIPPHLLFTTSHNXRLQ 636
D+IDF +PP +L+ SH RLQ
Sbjct: 455 DIIDFPSVPPGVLYDVSHQCRLQ 477
>AY327122-1|AAQ94616.1| 1686|Homo sapiens COMPase precursor protein.
Length = 1686
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 568 DLIDFIWIPPHLLFTTSHNXRLQ 636
D+IDF +PP +L+ SH RLQ
Sbjct: 455 DIIDFPSVPPGVLYDVSHQCRLQ 477
>AF140675-1|AAD56358.1| 997|Homo sapiens zinc metalloprotease
ADAMTS7 protein.
Length = 997
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 568 DLIDFIWIPPHLLFTTSHNXRLQ 636
D+IDF +PP +L+ SH RLQ
Sbjct: 455 DIIDFPSVPPGVLYDVSHQCRLQ 477
>AB209497-1|BAD92734.1| 527|Homo sapiens a disintegrin and
metalloprotease with thrombospondin motifs-7
preproprotein va protein.
Length = 527
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 568 DLIDFIWIPPHLLFTTSHNXRLQ 636
D+IDF +PP +L+ SH RLQ
Sbjct: 420 DIIDFPSVPPGVLYDVSHQCRLQ 442
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,284,722
Number of Sequences: 237096
Number of extensions: 1131685
Number of successful extensions: 1520
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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