Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1657
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0041 - 14051870-14052430,14052509-14052562 33 0.15
03_05_0509 - 25032494-25033156 32 0.35
10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376 31 0.61
10_06_0062 - 10233885-10234082,10235868-10236004,10236103-10236424 31 0.80
12_01_0502 + 3978329-3978506,3979324-3979480,3979895-3980089,398... 30 1.1
05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566... 30 1.1
09_06_0115 + 20944586-20945185 30 1.4
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298 30 1.4
03_02_0995 - 13071930-13072007,13072708-13072999,13073096-130732... 30 1.4
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 29 1.8
12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220... 29 2.4
04_03_0809 + 19896801-19897170,19897265-19897513,19897850-198979... 29 2.4
02_01_0174 - 1193696-1193726,1193822-1194175,1194307-1194542,119... 29 2.4
11_08_0066 - 28131521-28132012 28 4.3
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 28 4.3
03_05_0145 + 21254448-21255488 28 4.3
08_01_0676 - 5858945-5859496 27 7.5
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 27 7.5
05_02_0033 + 5847754-5847982,5848308-5848437,5849038-5849116,584... 27 7.5
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 27 7.5
04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103 27 7.5
02_05_0779 + 31702039-31702977 27 7.5
02_01_0687 - 5118774-5119412,5120359-5120424,5120636-5120690,512... 27 7.5
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 27 9.9
07_03_1465 - 26729872-26730909 27 9.9
07_01_0662 + 4972953-4973645,4973758-4974046,4974790-4974803,497... 27 9.9
04_04_0696 + 27328043-27329259,27329887-27330757 27 9.9
04_03_0901 + 20699814-20701169 27 9.9
04_01_0417 - 5523911-5523976,5525131-5525321,5525807-5526044 27 9.9
02_05_0166 + 26412217-26413403,26413918-26414800 27 9.9
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 27 9.9
01_05_0047 + 17557087-17558350,17558396-17558475,17559115-175591... 27 9.9
>09_04_0041 - 14051870-14052430,14052509-14052562
Length = 204
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 349 RGRPPGPFDTVAAAAAPGHRPDHP 420
RGRPP P D AAAAAP P P
Sbjct: 92 RGRPPKPKDAAAAAAAPAPAPAAP 115
>03_05_0509 - 25032494-25033156
Length = 220
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 295 HRTAHASRSFNRKREGTSRGRPPGPFDTVAAAAAPGHRPDHPXR 426
H H + +R + PP AA A H PDHP R
Sbjct: 12 HHHGHHHHHHHHRRHRSETSCPPTSVAVAAARAGDAHAPDHPLR 55
>10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376
Length = 746
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 7 ARLSRRKTRIKNKXSMRARAWTEPAIDEDSELKPRETPNVAARLTRTELSRTLNENGEAT 186
A+ +R+ K+K W E ID+D + K R ++ +R T N NG
Sbjct: 451 AKKQKRRALAKSKSEQAGLQWWERDIDDDLDAKGRSKWSMMKSWSRRSNGSTGNGNGNGN 510
Query: 187 G 189
G
Sbjct: 511 G 511
>10_06_0062 - 10233885-10234082,10235868-10236004,10236103-10236424
Length = 218
Score = 30.7 bits (66), Expect = 0.80
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 190 LAPYEELLEARVRDLSLALN---MSTAARSLGVHRRRGHRTAHASRSFNRKREGTSR-GR 357
L +E++L+ V + ++ ++TAA HRR+GHR A+ + K SR
Sbjct: 103 LVTFEDVLKQFVSKRNATMSRATIATAAEDDDGHRRQGHRGGEAAAAAPAKVAAQSRQEN 162
Query: 358 PPGPFDTVAAAAAPGHRPD 414
P P T A P P+
Sbjct: 163 PSSPSPTDEARPEPEPEPE 181
>12_01_0502 +
3978329-3978506,3979324-3979480,3979895-3980089,
3980190-3980244
Length = 194
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 250 MSTAARSLGVHRRRGHRTAHASRSFNRKREGTSRG 354
M+T+A G HRR G R A AS R R+GT +G
Sbjct: 1 MATSAERPGPHRREGQRQADAS----RLRQGTVKG 31
>05_07_0066 +
27453611-27453627,27454729-27454872,27455998-27456690,
27457700-27458111,27458220-27458297,27458938-27458953,
27459038-27459192
Length = 504
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = -2
Query: 459 PSLSTPSEALVTRRVVRSM-SRGCGGGDSIERTGRSST-------RCTFTFSIKTSRGMG 304
P +TPS + T RV S+ +RG GGGD+ GRS+ RC+ F+
Sbjct: 245 PPSTTPSRSS-TLRVTSSLPARGGGGGDA-HHHGRSALPHNSSIHRCSGEFAFVAMLEFD 302
Query: 303 GAMTSSSMNSERASXRAHVQREAEVPH 223
G M S A+ +A Q++ H
Sbjct: 303 GMMMIRSGEQSAAATKAEKQQQRPAAH 329
>09_06_0115 + 20944586-20945185
Length = 199
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 302 PPMPLEVLIENVKVHLVEDRPVRSILSPP-PQPLDIDLTTLRVTRASD---GVLRL 457
PP PL L +N ++ + +R+ SPP P P D + TL RA+D G LRL
Sbjct: 33 PPPPLPFLPDNPRLVRLH---LRTTSSPPRPSPTDDPVVTLHAIRATDADVGGLRL 85
>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
Length = 439
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 328 RKREGTSRGRPPGPFDTVAAAAAPGHRPDHPXRHEG 435
RKR RPP F AAAAA P H H G
Sbjct: 83 RKRPRPPVRRPPVHFTAAAAAAAAAAPPHHHHHHHG 118
>03_02_0995 -
13071930-13072007,13072708-13072999,13073096-13073226,
13073564-13074466,13074545-13074631,13075141-13075224,
13075355-13075408,13075903-13076034,13076164-13076259,
13076508-13076777,13078711-13078800,13079942-13080008,
13080150-13080241,13080359-13080487
Length = 834
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +1
Query: 13 LSRRKTRIKNKXSMRARAWTEPAIDEDSELKPRETPNVAARLTRTELSRTLNENGEATGL 192
LSR T K ++ A + PA+ S P+ + + ++ ++T+ EN +
Sbjct: 140 LSRLSTLPKRNTNLMASGISRPALMPSSASSPQSSSGLPSKEVMPIPNKTIIENKSSVYA 199
Query: 193 APYEELLEARVRDLSLALNMSTAARS 270
A +L +AR R SL +TA R+
Sbjct: 200 AVVRDLNDARGR--SLPFGPATAFRA 223
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Frame = +1
Query: 124 VAARLTRTE-LSRTLNENGEATGLAP---------YEELLEARVRDLSLALNMSTAARSL 273
++ARLT+T L+ +ENG L YE L A VR L +A L
Sbjct: 1512 LSARLTKTHTLAAQFSENGSLASLLNLPKTCIFPGYETLASAIVRHLIEDPQTLQSAMEL 1571
Query: 274 GVHRRRGHRTAHASRSF 324
+ + R +HASRSF
Sbjct: 1572 EIRQSLSTRGSHASRSF 1588
>12_02_0875 -
23920023-23920967,23921045-23921599,23921678-23922083,
23922175-23922452
Length = 727
Score = 29.1 bits (62), Expect = 2.4
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +1
Query: 70 TEPAIDEDSELKPRETPN--VAARLTRTELSRTLNENGEATGLAPYEELLEARVRDLSLA 243
TEP E S L P+ PN + A+L R + R +N G G E + R
Sbjct: 417 TEPYACEPSSL-PKYAPNKEMDAKL-REDSRRRVNVGGRNHGGVGGGEATKRLSRGHKSM 474
Query: 244 LNMSTAARSLGV--HRRRGHRTAHASRSFNRKREGTSR 351
+ + AA + V +R GH HA S R G +R
Sbjct: 475 QDTTAAATAAAVVASQRHGHGHVHAEESLPRANGGEAR 512
>04_03_0809 +
19896801-19897170,19897265-19897513,19897850-19897900,
19898007-19898267,19898427-19898479,19898746-19898887,
19898972-19899226,19899616-19900640
Length = 801
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 178 EATGLAPYEELLEARVRDLSLALNMSTAARSLGVHRRRGHRTAHASRSFNRKREGTSRGR 357
E + AP++E+++A D A + S VH + A + R+ + + G
Sbjct: 663 EESAFAPHQEMIDAAADDDDEAAARPRRSTSSAVHSEEAIQAASSGRTTASSVQLQAGGE 722
Query: 358 PPGPFD 375
PP D
Sbjct: 723 PPAAMD 728
>02_01_0174 -
1193696-1193726,1193822-1194175,1194307-1194542,
1194629-1194741,1195963-1196161,1196427-1196513
Length = 339
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 289 RGHRTAHASRSFNRKREGTSRGRPPGPFDTVAAAAAPGH---RPDHPXRHE 432
RG H S +G RG PP +D A+PG+ R P R+E
Sbjct: 287 RGSPDYHRGASPQGGNKGDERGSPPNNYDRERREASPGYDRPRSRSPARYE 337
>11_08_0066 - 28131521-28132012
Length = 163
Score = 28.3 bits (60), Expect = 4.3
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Frame = +1
Query: 85 DEDSELKPRETPNVAARLTRTELSRTLN-ENGEATGLAPY--EELLEARVRD-----LSL 240
D EL+ E N ++L ++ +L+ G T ++ EE E R R +
Sbjct: 10 DLQLELEEEEDDNQLSQLAELDVQLSLSLACGSTTAMSSSGDEEDAEPRRRRRDEEAAAA 69
Query: 241 ALNMSTAARSLGVHRRRG-HRTAHASRSFNRKREGTSR 351
A T R H+ G HRT+H + N++R G S+
Sbjct: 70 AFECRTCGRRFPSHQALGGHRTSHLRPTTNKRRPGPSK 107
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 28.3 bits (60), Expect = 4.3
Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +1
Query: 16 SRRKTRIKNKXSMRARAWTEPAIDEDSELKPRETPNVAARLTRTELSRTLNENGEATGLA 195
SR + R ++K R R D D K R+ R+E R ++ +
Sbjct: 68 SRERERERDKDKERDRDRDRDRRDRDRGDKDRDRDRHREHRDRSE-RREHHDRERSDDRD 126
Query: 196 PYEELLEARVRDLSLALNMSTAARSLGVHRRRGHRTAHASRSFNRKR-EGTSRGRPPGPF 372
R RD + +RS + R R+ SRS + KR G +G P
Sbjct: 127 RRRGHDSERRRDRDRDGHRRHRSRSRSPSKGRDRRSRSRSRSRSSKRVSGFDQG-PQAAI 185
Query: 373 DTVAAAAAPGHRP 411
+AA AAPG P
Sbjct: 186 PALAAGAAPGQVP 198
>03_05_0145 + 21254448-21255488
Length = 346
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 284 EDEVIAPPMPLEVLIENVKVHLVEDRPVRSILSPPPQP 397
E EV+A P P+ V E VK L E S PPP+P
Sbjct: 29 EKEVVALPPPVVVEEEEVKEVLSETAVPVSRPRPPPEP 66
>08_01_0676 - 5858945-5859496
Length = 183
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +1
Query: 88 EDSELKPRETPNVAARLTRTELSRTLNENGEATGLAPYEELLEARVRDLSLALNMSTAAR 267
+ S + R+ PNVAA R L GL P A + L L L +T
Sbjct: 8 QPSGVDGRDEPNVAAANRRNGAHAVLAAASALVGLPPEYAKARAVLLLLLLLLGCATVHL 67
Query: 268 SLGVHRRR 291
S+G +R R
Sbjct: 68 SMGGNRHR 75
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 GQRTQTPRNTERSS*IDQDRTIE-NFKRKRRSNRPGSIRR 206
GQ+ R+ ERS DQ+R++E + +R + ++ GS+ R
Sbjct: 75 GQQRSHQRDQERSHQHDQERSVERDQERSHQRDQEGSVER 114
>05_02_0033 +
5847754-5847982,5848308-5848437,5849038-5849116,
5849194-5849251,5849732-5850795,5850899-5851003,
5851369-5851473
Length = 589
Score = 27.5 bits (58), Expect = 7.5
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Frame = +1
Query: 22 RKTRIKNKXSMRARAWTE---------PAIDEDSELKPRETPNVAARLTRTELSRTLNEN 174
+K ++NK S R R WT+ PA D+ P E R N+
Sbjct: 482 KKKPVQNKSSKRQRNWTDKQHKKNKKAPAKVTDAHQSPTEQEAQTQLAAENCCRRNENDF 541
Query: 175 GEATGLAPYEELLEARVRDLSLALN-MSTAARSLGV 279
++ Y ELL + + LALN S+ R +G+
Sbjct: 542 QGYEFISSYTELLTSVSDNYQLALNKQSSGQRGVGL 577
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -2
Query: 405 MSRGCGGGDSIERTGRSSTRCTFTFSIKTSRGMGGAMTSSSMNSERASXRAHVQRE 238
M G G G ++ER+GR S + RG G M + ++A+ QR+
Sbjct: 254 MGGGGGPGAALERSGRRSGATAAGLARSRQRGGGSVMWGTVERVDKAARPRAAQRD 309
>04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103
Length = 301
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 238 G*GPAREPPVALRMEPGRLLRRFRLKFSIVL 146
G GP PP + E G LLR +R + +IVL
Sbjct: 93 GDGPILPPPAQMGAEEGILLREWRRQNAIVL 123
>02_05_0779 + 31702039-31702977
Length = 312
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 328 RKREGTSRGRPPGPFDTVAAAAAPGHRP 411
++R TSR PP P + AAA G P
Sbjct: 45 KRRHSTSRSGPPPPSAALFKAAASGRNP 72
>02_01_0687 -
5118774-5119412,5120359-5120424,5120636-5120690,
5120795-5121354
Length = 439
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 295 HRTAHASRSFNRKREGTSRGRP-PGPFDTVAAAAAP 399
HR AH + +R G + G P P P+D +AAAA P
Sbjct: 13 HRGAH--KMMHRDPYGGAPGMPGPFPYDMLAAAAPP 46
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 465 GGPSLSTPSEALVTRRVVRSMSRGCGGG 382
GG L E + R VV SRGCGGG
Sbjct: 111 GGDLLRAELEEAIAR-VVADRSRGCGGG 137
>07_03_1465 - 26729872-26730909
Length = 345
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 356 DRPVRSILSPPPQP--LDIDLTTLRVTRASDGVLR 454
DR RS SPPP P + + L L SDG +R
Sbjct: 5 DRSRRSSSSPPPLPWTVRVQLAALSAAHRSDGSVR 39
>07_01_0662 +
4972953-4973645,4973758-4974046,4974790-4974803,
4974848-4974856
Length = 334
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 346 SRGRPPGPFDTVAAAAAPGHRPDHP 420
SRG P P +A A+ P HRP P
Sbjct: 172 SRGPSPVPTPALAPASPPRHRPASP 196
>04_04_0696 + 27328043-27329259,27329887-27330757
Length = 695
Score = 27.1 bits (57), Expect = 9.9
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = -2
Query: 396 GCGGGDSIERTGRSSTRCTFTFSIKTSRGMGGAMTSSSMNSERASXRAHVQRE--AEVPH 223
GCG S+ + S TRC F + M +S+ S + RA +RE + H
Sbjct: 310 GCGDIGSVYLSELSGTRCYFAMKV---------MDKASLASRKKLNRAQTEREILQLLDH 360
Query: 222 ASLQ*LFVWSQAGCFAVFV*SSR*FCPG 139
L L+ + F+ V FCPG
Sbjct: 361 PFLPTLYTHFETDRFSCLVME---FCPG 385
>04_03_0901 + 20699814-20701169
Length = 451
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 416 WSGRCPGAAAAATVSNGPGGLPRDVPS 336
WS P + A+V++ P GL R V S
Sbjct: 103 WSSSSPATSGDASVTSSPAGLVRQVAS 129
>04_01_0417 - 5523911-5523976,5525131-5525321,5525807-5526044
Length = 164
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 165 KRKRRSN-RPGSIRRATGGSRAGPQPRAEH 251
KRKR+ P R+ TGG R G EH
Sbjct: 4 KRKRKERLSPAVFRQVTGGRRVGCHTEVEH 33
>02_05_0166 + 26412217-26413403,26413918-26414800
Length = 689
Score = 27.1 bits (57), Expect = 9.9
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = -2
Query: 396 GCGGGDSIERTGRSSTRCTFTFSIKTSRGMGGAMTSSSMNSERASXRAHVQRE--AEVPH 223
GCG S+ + S TRC F + M +S+ S + RA +RE + H
Sbjct: 300 GCGDIGSVYLSELSGTRCYFAMKV---------MDKASLASRKKLNRAQTEREILQLLDH 350
Query: 222 ASLQ*LFVWSQAGCFAVFV*SSR*FCPG 139
L L+ + F+ V FCPG
Sbjct: 351 PFLPTLYTHFETDRFSCLVME---FCPG 375
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 250 MSTAARSLGVHRRRGHRTAH--ASRSFNRKREGTSRGRP 360
M + AR G G R++H SRS +R R RGRP
Sbjct: 123 MRSRARVRGYSDHEGRRSSHYGRSRSRSRSRSPRYRGRP 161
>01_05_0047 +
17557087-17558350,17558396-17558475,17559115-17559149,
17559545-17559551,17560405-17560719
Length = 566
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 392 AAAATVSNGPGGLPRDVPSRFLLKLL 315
A AATVS PGG D+PS L + L
Sbjct: 143 ALAATVSGRPGGCYLDIPSDVLHQTL 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,447,192
Number of Sequences: 37544
Number of extensions: 352679
Number of successful extensions: 1237
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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