Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1654
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 149 1e-35
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 149 1e-35
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 149 1e-35
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 149 1e-35
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 149 1e-35
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 149 1e-35
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 145 2e-34
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 130 6e-30
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 130 6e-30
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 130 6e-30
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 130 6e-30
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 124 3e-28
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 107 4e-23
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 107 5e-23
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 6e-06
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 6e-06
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 6e-06
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 6e-06
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 6e-06
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 6e-06
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 6e-06
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 8e-05
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 8e-05
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 8e-05
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 44 0.001
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 44 0.001
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 0.002
BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein. 31 7.2
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 149 bits (361), Expect = 1e-35
Identities = 78/136 (57%), Positives = 90/136 (66%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYD + +
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 120 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 149 bits (361), Expect = 1e-35
Identities = 78/136 (57%), Positives = 90/136 (66%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYD + +
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 120 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 149 bits (361), Expect = 1e-35
Identities = 78/136 (57%), Positives = 90/136 (66%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYD + +
Sbjct: 71 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 130
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 131 LAPDYDALDVANKIGI 146
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 111 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 147
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 149 bits (361), Expect = 1e-35
Identities = 78/136 (57%), Positives = 90/136 (66%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYD + +
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 120 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 149 bits (361), Expect = 1e-35
Identities = 78/136 (57%), Positives = 90/136 (66%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYD + +
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 120 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 149 bits (361), Expect = 1e-35
Identities = 78/136 (57%), Positives = 90/136 (66%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYD + +
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 120 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 145 bits (351), Expect = 2e-34
Identities = 76/136 (55%), Positives = 88/136 (64%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+AMKKIEDNNTLVFIV ANKH I AVKKLYD + +
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQISQAVKKLYDIDVAKVNTLIRPDGEKKAYVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
+VAKVNTLIRPDG KAYV LA + + K+ I
Sbjct: 120 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 130 bits (314), Expect = 6e-30
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 709
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL D
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCD 118
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 130 bits (314), Expect = 6e-30
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 709
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL D
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCD 118
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 130 bits (314), Expect = 6e-30
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 709
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL D
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCD 118
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 130 bits (314), Expect = 6e-30
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 709
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL D
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCD 118
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 124 bits (300), Expect = 3e-28
Identities = 65/136 (47%), Positives = 83/136 (61%)
Frame = +2
Query: 413 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 592
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 593 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRT 772
PLT+E+A+K+ E+NNTL+F V ANKH IK AVKKLYD +
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVR 139
Query: 773 TRXKYDXLDVXNKIGI 820
YD LDV NKIGI
Sbjct: 140 LAPDYDALDVANKIGI 155
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 107 bits (258), Expect = 4e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +2
Query: 482 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 661
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTLVFTVDV 61
Query: 662 SANKHHIKAAVKKLYD 709
ANKH I+ AVKKLYD
Sbjct: 62 KANKHQIRQAVKKLYD 77
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLAS 821
+VAKV TLI PD KAYV LA + + + TKL S
Sbjct: 79 DVAKVTTLICPDKEKKAYVRLAPDYDAFNVVTKLGS 114
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 107 bits (257), Expect = 5e-23
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +2
Query: 482 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 661
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTLVFTVDV 61
Query: 662 SANKHHIKAAVKKLYD 709
ANKH I+ AVKKLYD
Sbjct: 62 KANKHQIRQAVKKLYD 77
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 714 NVAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLAS 821
+VAKV TLI PD KAYV LA + + + TKL S
Sbjct: 79 DVAKVTTLICPDKENKAYVRLAPDYDAFDVVTKLGS 114
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 8e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 8e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 8e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 433
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 432 L*ALSALVTGF 400
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 43.6 bits (98), Expect = 0.001
Identities = 31/69 (44%), Positives = 34/69 (49%)
Frame = +2
Query: 614 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRTTRXKYDX 793
MKK EDNN LVF V+ ANKH KKLYD + VR Y+
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTLIRPDGEKEHVRLA-PDYNA 54
Query: 794 LDVXNKIGI 820
LDV NKIGI
Sbjct: 55 LDVANKIGI 63
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 43.6 bits (98), Expect = 0.001
Identities = 31/69 (44%), Positives = 34/69 (49%)
Frame = +2
Query: 614 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRTTRXKYDX 793
MKK EDNN LVF V+ ANKH KKLYD + VR Y+
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTLIRPDGEKEHVRLA-PDYNA 54
Query: 794 LDVXNKIGI 820
LDV NKIGI
Sbjct: 55 LDVANKIGI 63
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 0.002
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -3
Query: 612 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 472
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
>BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein.
Length = 392
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 518 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN-NTLVFIVHTSANKHHIKAA 691
P+ YP KSL +R I FPL A+KK+ED T + + H +++A
Sbjct: 69 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLEDTWYTRFALKYQPIENHRLESA 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,499,012
Number of Sequences: 237096
Number of extensions: 1586276
Number of successful extensions: 7287
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7257
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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