Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1654
(869 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 165 5e-41
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 165 5e-41
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 164 2e-40
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 159 5e-39
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 37 0.042
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 2.7
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 2.7
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 165 bits (402), Expect = 5e-41
Identities = 80/135 (59%), Positives = 96/135 (71%)
Frame = +2
Query: 416 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 595
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 596 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRTT 775
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYD K + +
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 776 RXKYDXLDVXNKIGI 820
YD LD+ NKIGI
Sbjct: 254 ARDYDALDIANKIGI 268
Score = 37.1 bits (82), Expect = 0.031
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 717 VAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
VAKVN LIRPDG KAYV LA + + K+ I
Sbjct: 234 VAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 165 bits (402), Expect = 5e-41
Identities = 80/135 (59%), Positives = 96/135 (71%)
Frame = +2
Query: 416 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 595
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 596 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRTT 775
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYD K + +
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 776 RXKYDXLDVXNKIGI 820
YD LD+ NKIGI
Sbjct: 262 ARDYDALDIANKIGI 276
Score = 37.1 bits (82), Expect = 0.031
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 717 VAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
VAKVN LIRPDG KAYV LA + + K+ I
Sbjct: 242 VAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 164 bits (398), Expect = 2e-40
Identities = 80/135 (59%), Positives = 95/135 (70%)
Frame = +2
Query: 416 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 595
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 596 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRTT 775
LT+EAAMKKIEDNNTLVF+ H ANK H++AAV+KLYD K + +
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 776 RXKYDXLDVXNKIGI 820
YD LD+ NKIGI
Sbjct: 262 ARDYDALDIANKIGI 276
Score = 37.1 bits (82), Expect = 0.031
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 717 VAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
VAKVN LIRPDG KAYV LA + + K+ I
Sbjct: 242 VAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 159 bits (386), Expect = 5e-39
Identities = 79/135 (58%), Positives = 95/135 (70%)
Frame = +2
Query: 416 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 595
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 596 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDXKCC*SQHTHQA*W*XXSVRTT 775
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYD K + +
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 776 RXKYDXLDVXNKIGI 820
YD LD+ NKIGI
Sbjct: 254 ARDYDALDIANKIGI 268
Score = 37.1 bits (82), Expect = 0.031
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 717 VAKVNTLIRPDGXXKAYVPLAXNMTHWTLXTKLASI 824
VAKVN LIRPDG KAYV LA + + K+ I
Sbjct: 234 VAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 36.7 bits (81), Expect = 0.042
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 532 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAP 678
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEP 211
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 454 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 362
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 454 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 362
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,095,917
Number of Sequences: 53049
Number of extensions: 468981
Number of successful extensions: 1335
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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