Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1652
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   2.1  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   2.1  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   2.1  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   2.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   2.1  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    25   3.6  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   6.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   6.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.3  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 514 NNCGCKSDTMLCVQRASSTMCGNH 443
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 514 NNCGCKSDTMLCVQRASSTMCGNH 443
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 514 NNCGCKSDTMLCVQRASSTMCGNH 443
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 514 NNCGCKSDTMLCVQRASSTMCGNH 443
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 514 NNCGCKSDTMLCVQRASSTMCGNH 443
           +NC C +DT  C   ++  +C  H
Sbjct: 592 DNCECTTDTTGCKAPSNDAVCSGH 615


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 362 CCVIAAFHFGDRLDAFVSHKRCY 294
           CC++  F F   L  F+S   C+
Sbjct: 44  CCLVGTFPFNSFLAGFISTVSCF 66


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 90  MKWKQARGKFYPQLSYLIKVNTPRAVMQE 176
           + W +   KFY  L Y  K  + +A+++E
Sbjct: 776 LHWVEFMSKFYEGLGYAFKPFSFKAILEE 804


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 544 AAGRLLGSFPNNCGCKSDTMLCVQRASS 461
           AA +L     N CG ++DT  CVQ   S
Sbjct: 57  AAYQLQVEATNTCGDETDTDFCVQTGYS 84


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 450 PHMVELALWTHNIVSDLQPQLLGKEPN 530
           P+ VEL     N++S +Q     K+PN
Sbjct: 615 PNSVELLYLNDNLISKVQSYTFFKKPN 641


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,733
Number of Sequences: 2352
Number of extensions: 18376
Number of successful extensions: 268
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)