Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1652
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60255-1|AAA36594.1|  527|Homo sapiens cerebroside sulfate activ...    32   2.1  
D00422-1|BAA00321.1|  527|Homo sapiens sphingolipid activator pr...    31   4.8  
AB209776-1|BAD93013.1|  530|Homo sapiens prosaposin variant prot...    31   4.8  

>M60255-1|AAA36594.1|  527|Homo sapiens cerebroside sulfate
           activator protein protein.
          Length = 527

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 306 MADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 482
           +  +C+Q + +++ +  T   ++   V H++  CDRL        K +     E+A+   
Sbjct: 197 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADISKNYISQYSEIAIQMM 256

Query: 483 NIVSDLQPQ 509
             + D QP+
Sbjct: 257 MHMQDQQPK 265


>D00422-1|BAA00321.1|  527|Homo sapiens sphingolipid activator
           proteins protein.
          Length = 527

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 306 MADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 482
           +  +C+Q + +++ +  T   ++   V H++  CDRL        K +     E+A+   
Sbjct: 197 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMM 256

Query: 483 NIVSDLQPQ 509
             + D QP+
Sbjct: 257 MHMQDQQPK 265


>AB209776-1|BAD93013.1|  530|Homo sapiens prosaposin variant
           protein.
          Length = 530

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 306 MADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 482
           +  +C+Q + +++ +  T   ++   V H++  CDRL        K +     E+A+   
Sbjct: 200 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMM 259

Query: 483 NIVSDLQPQ 509
             + D QP+
Sbjct: 260 MHMQDQQPK 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,074,948
Number of Sequences: 237096
Number of extensions: 2608562
Number of successful extensions: 13321
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13321
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)