Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1649
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    87   7e-19
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.8  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    24   5.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.6  

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 86.6 bits (205), Expect = 7e-19
 Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
 Frame = +3

Query: 66  MHKFVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEE 245
           M++ V   L+A ++ L +   +     S+     + C++++  N     +GG P +G+  
Sbjct: 1   MNRLVIFVLLAGLVALGSGIKL-PASYSQCKTGDEPCVVQAITNTFQKFQGGVPALGLAS 59

Query: 246 AEPIVIDELSIALGAGPDGYRATFKDIHASGASNMTITNVRSDLET-HQFQLTLYGPHIS 422
            +P+ IDE+ I  G GP      FK++  +G  ++ +   +   ET +  ++ L  P  S
Sbjct: 60  LDPLRIDEMDIVQGTGPVNIVLNFKNVDITGFKDVAVKKAKGFTETPNVMEMNLRLPVAS 119

Query: 423 ARARYRSSGVLLLVRASGGGEYWGEYHGVKAKVYFRGAPYER-DGRTYLKLQQLKLDFSV 599
               Y+  G +L++   G G            + + GA  +R +G+ Y ++ ++K  F  
Sbjct: 120 LVGSYKIKGKVLILPIQGEGTSNMTMVNCDFLMKWNGALEKRANGKEYYQMNKIKATFDT 179

Query: 600 KDIKMGVENLDNSNAVLQAALNLFISTNAQELLKEMKPEL 719
               M + NL N +  L   +N F++ N +++LKE+KP +
Sbjct: 180 TRFYMHLTNLFNGDKALGDNMNQFLNDNWEDILKELKPAI 219


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 306 RATFKDIHASGASNMTITNVRSDLETHQFQLTLYGPH 416
           RAT K++H     N    + +   + H + LT +G H
Sbjct: 330 RATSKNVHECKPCNCNGYSTKCFFDRHLYNLTGHGGH 366


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = +2

Query: 260  DRRTVYSPRSWSRRLQSNLQRHPCVRSIEHDHH*RQVGSRDPSVPADAVRTS 415
            ++  V  PR    R +  L        + H HH    G   P  PA+A  +S
Sbjct: 1291 EKEFVVMPRLPPSRSEDTLNSSHLHHHLHHGHHHHHGGEGVPMGPANAAPSS 1342


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +3

Query: 51  VKKIRMHKFVALFLIATVI-----PLKTNANIFGGKCSRQDPNVDACLLRSFNNL 200
           +++ R   +VA  L+   I     P  T ANIFGGK   Q    D  L    N L
Sbjct: 1   MERDRSSSYVAAALLLVCISLASAPRGTEANIFGGKL-YQKAQQDCILFMGINPL 54


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 56   KNKNA*IRGVVFDRDSDTAENECKHIRRKMFKTGSKRRR 172
            K K    RG   D DS+  E E    R+K   +G +++R
Sbjct: 956  KRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKR 994


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,154
Number of Sequences: 2352
Number of extensions: 15039
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)