Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1649
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    86   3e-19
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.3  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 86.2 bits (204), Expect = 3e-19
 Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
 Frame = +3

Query: 60  IRMHKFVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGI 239
           IR      + ++A  + L  N  I      +++ N   C+  +  + V  L GG     I
Sbjct: 7   IRFFVLTTMLMMAIAVELPNNWRICDRSLPQKEYN--QCIAEAVRDAVVSLAGGLKSFKI 64

Query: 240 EEAEPIVIDELSIALGAGPDGYRATFKDIHASGAS-NMTITNVRSDLETHQFQLTLYGPH 416
              EP+ +D + I    G    R  +K+I   G + N+ I N   D +        Y P 
Sbjct: 65  LPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNLEIKNYNIDWDKCILSSESYNPQ 124

Query: 417 ISARARYRSSGVLLLVRASGGGEYWGEYHGVKAKVYFRGAPYERDGRTYLKLQQLKLDFS 596
           +   A Y+  G +LL+   G G+     + +K+        YE++G TYL++++  + F+
Sbjct: 125 VDFVADYKIEGKVLLLPVRGAGKSNITMYDLKSHNDIYCEKYEKNGETYLRIKKHAVKFN 184

Query: 597 VKDIKMGVENLDNSNAVLQAALNLFISTNAQELLKEMKPELKRTWRI 737
              +K+  ENL + N  L   +N FI+ N++ L KE++   + T+ +
Sbjct: 185 PAKVKLRFENLFDGNKELGEQMNRFINENSELLFKELQAAYEETFSL 231


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 156 DPNVDACLLRSFNNLVDYLKGGAPEMG 236
           DP +   LL+  N  V    GG P++G
Sbjct: 88  DPGMFPALLKDPNGNVVARNGGVPQLG 114


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +3

Query: 564 LKLQQLKLDFSVKDIKMGVENLDN 635
           +K+Q++ +DF V  +  GV N+++
Sbjct: 486 IKMQKVLIDFWVSFVNNGVPNVNS 509


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +3

Query: 564 LKLQQLKLDFSVKDIKMGVENLDN 635
           +K+Q++ +DF V  +  GV N+++
Sbjct: 486 IKMQKVLIDFWVSFVNNGVPNVNS 509


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 496 NTMASRPRYTSAALRTNAT 552
           N+ AS PRY SAA  ++ +
Sbjct: 821 NSPASSPRYLSAAATSSTS 839


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,857
Number of Sequences: 438
Number of extensions: 4018
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)