Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1633
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          27   0.89 
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          27   0.89 
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          27   0.89 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.3  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 166 LRPDLCFLALATVSGYCCTVSGSLLESSRELPD 68
           ++  LC++AL          S S LE S ELPD
Sbjct: 213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 166 LRPDLCFLALATVSGYCCTVSGSLLESSRELPD 68
           ++  LC++AL          S S LE S ELPD
Sbjct: 213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 166 LRPDLCFLALATVSGYCCTVSGSLLESSRELPD 68
           ++  LC++AL          S S LE S ELPD
Sbjct: 213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 110 SIWVTSRIFSGTTRSFHFSFKLDNIGSALI 21
           ++W+    F G  R F  SF +D  G  L+
Sbjct: 57  ALWIRDGFFDGKQREFRSSFFVDESGWLLV 86


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 433 DILALLRAYRPRSINPLDEV-PSKLRAVVVNGQH 531
           D+L L   YRP   NP   V  SK  AVV  G++
Sbjct: 88  DVLVLSHTYRPPENNPRWAVDASKKVAVVATGRY 121


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 102 PDTVQQYPETVANARKQRSGRSNPLLRSEETP*PE 206
           P T Q+ PE+V +   +  GRS   L+S + P P+
Sbjct: 391 PTTSQENPESVTDEEIRNIGRS---LKSRKVPGPD 422


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 134  CQRKKAEIWPKQSTPTFR 187
            C R +   W KQ+ PTFR
Sbjct: 1129 CNRGQWPSWMKQNLPTFR 1146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,983
Number of Sequences: 2352
Number of extensions: 14880
Number of successful extensions: 79
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)