Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1532
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.35 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   1.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.4  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 19/91 (20%), Positives = 41/91 (45%)
 Frame = -2

Query: 623 ERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGL 444
           ER + P+ R Q  + +HQQ     Q  R+Q QR    +   R   ++  Q   + +++  
Sbjct: 295 ERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQ 354

Query: 443 DPQEDDGQTRRPRRVHXRQETPRIERINILH 351
             Q+     ++ ++   +Q+  +  R ++ H
Sbjct: 355 QQQQQQQHQQQQQQWQQQQQQQQQPRQSLPH 385



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = -2

Query: 551 QDLREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHXRQETPRI 372
           Q  ++Q Q+   G  +V    R+  Q     ++Q   PQ+   Q +RP++   +Q  P  
Sbjct: 436 QQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKP-- 493

Query: 371 ERINILHVTP 342
            +  ++ V+P
Sbjct: 494 AKPELIEVSP 503


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 637 NTSWXSGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 473
           NT     ASA   A++  + V    +E      S  ND+++ D++SG   + + K
Sbjct: 828 NTITYGTASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISGADSENEAK 882


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 528 LKLLSQVLMTSRMLLVTSLSSL 593
           LKLL+ V MTS+M+L+T L  L
Sbjct: 897 LKLLA-VCMTSQMMLITQLMPL 917


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,522
Number of Sequences: 2352
Number of extensions: 13139
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)