Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1532
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    53   2e-07
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    42   6e-04
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    34   0.094
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    34   0.094
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    34   0.094
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    34   0.094
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    34   0.094
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    34   0.094
Z82275-3|CAL44962.1|  478|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z82265-8|CAB05169.2|  478|Caenorhabditis elegans Hypothetical pr...    30   2.0  
L10986-8|AAA28013.2|  286|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    28   6.2  

>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 29/87 (33%), Positives = 45/87 (51%)
 Frame = -3

Query: 643 PANTSWXSGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQR 464
           P N  W +   A E AL LE     S+ ++  T   + ND HL D++  ++LDEQ K   
Sbjct: 84  PENDEWGTALKAFEAALALEKFNNESLLKLHSTA-GNHNDAHLTDFIEEKYLDEQVKSIN 142

Query: 463 DLAGKASTLKKMMDKHAALGEFXFDKK 383
           + A   + LK++      +GE+ FDK+
Sbjct: 143 EFARMVANLKRV---GPGVGEYVFDKE 166


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = -3

Query: 643 PANTSWXSGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQR 464
           P    W +   A E AL LE     S+ ++    E   ND HL +Y+  ++L+EQ     
Sbjct: 84  PEKDEWGTVLEAFEAALALERANNASLLKLHGIAEQR-NDAHLTNYIQEKYLEEQVHSIN 142

Query: 463 DLAGKASTLKKMMDKHAALGEFXFDKK 383
           + A   + +K+       LGE+ FDK+
Sbjct: 143 EFARHIANIKR---AGPGLGEYLFDKE 166


>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 611  SPRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLD 441
            SP+  PQ    + Q      QD   E L R+ P   FV  +P  ++  P+RP +  LD
Sbjct: 1949 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLD 2006


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 611  SPRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLD 441
            SP+  PQ    + Q      QD   E L R+ P   FV  +P  ++  P+RP +  LD
Sbjct: 1971 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLD 2028


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
           protein R11A8.7d protein.
          Length = 1427

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 611 SPRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLD 441
           SP+  PQ    + Q      QD   E L R+ P   FV  +P  ++  P+RP +  LD
Sbjct: 792 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLD 849


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
           protein R11A8.7c protein.
          Length = 1405

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 611 SPRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLD 441
           SP+  PQ    + Q      QD   E L R+ P   FV  +P  ++  P+RP +  LD
Sbjct: 770 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLD 827


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 611  SPRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLD 441
            SP+  PQ    + Q      QD   E L R+ P   FV  +P  ++  P+RP +  LD
Sbjct: 1949 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLD 2006


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 611  SPRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLD 441
            SP+  PQ    + Q      QD   E L R+ P   FV  +P  ++  P+RP +  LD
Sbjct: 1971 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLD 2028


>Z82275-3|CAL44962.1|  478|Caenorhabditis elegans Hypothetical
           protein F02H6.2 protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 693 EGKXDRLRNRPSSRTGPPQTRRGRAAHQPSSTPSS 589
           E K + L+N P++R+  PQ  R    ++PSS+ S+
Sbjct: 409 EQKDEDLKNEPAARSEDPQDSREDVGNEPSSSNSA 443


>Z82265-8|CAB05169.2|  478|Caenorhabditis elegans Hypothetical
           protein F02H6.2 protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 693 EGKXDRLRNRPSSRTGPPQTRRGRAAHQPSSTPSS 589
           E K + L+N P++R+  PQ  R    ++PSS+ S+
Sbjct: 409 EQKDEDLKNEPAARSEDPQDSREDVGNEPSSSNSA 443


>L10986-8|AAA28013.2|  286|Caenorhabditis elegans Hypothetical
           protein F10E9.2 protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 515 GRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRV 399
           G L   G  R  ++G TR  R+G   +   G+TRR ++V
Sbjct: 110 GELSNNGAERGKIRGSTRATRKGSVNKSKSGRTRRHKKV 148


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -2

Query: 500 RGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHXRQETPRIERINILHVTPPLR 333
           R  PRRT + P+ PRR+ +           PRR   R  +P   R       PP +
Sbjct: 105 RSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAK 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,136,434
Number of Sequences: 27780
Number of extensions: 291149
Number of successful extensions: 754
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)