Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1526
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 166 8e-41
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 166 8e-41
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 166 8e-41
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 166 8e-41
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 164 2e-40
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 163 7e-40
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 161 2e-39
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 114 2e-25
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 50 6e-06
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 50 6e-06
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 46 1e-04
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 36 0.14
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 36 0.14
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 36 0.14
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 36 0.14
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 36 0.14
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 36 0.14
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 166 bits (403), Expect = 8e-41
Identities = 89/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 164 bits (399), Expect = 2e-40
Identities = 88/191 (46%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG++
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYE 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 163 bits (395), Expect = 7e-40
Identities = 88/191 (46%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS QAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ DI E ++F IGYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 161 bits (391), Expect = 2e-39
Identities = 87/191 (45%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYG 516
NTGLGPEKTS FQAL I TKIS+G IEI++DV ++K GDKVGAS ATLLNMLNI P S+G
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFG 186
Query: 515 LVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXAIGYPTIASAPHSIANGFK 336
LV++QV+D+G+I+ PE+ D E ++F GYPT+AS PHSI NG+K
Sbjct: 187 LVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYK 246
Query: 335 NLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
+L +K F+ DPS F
Sbjct: 247 RVLALSVETDYTFPLAENVKAFLADPSAFVAAAPVAADTTAAPAAAAAPAKVEAKEESEE 306
Query: 158 SDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 307 SDEDMGFGLFD 317
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 114 bits (275), Expect = 2e-25
Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = -3
Query: 590 KPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFAPEIXDIKPEDXRAKFQXXXXX 411
K GDKVGAS ATLLNMLNI P S+GLV++QV+D+G+I+ PE+ DI E ++F
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 410 XXXXXXAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXX 234
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPV 121
Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 122 AAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 157
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 50.4 bits (115), Expect = 6e-06
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -3
Query: 389 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXX 213
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 167 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 226
Query: 212 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 227 PAAAAAPAKVEAKEESEESDEDMGFGLFD 255
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEII 609
NTGLGPEKTS FQAL I TKIS+G IEI+
Sbjct: 127 NTGLGPEKTSFFQALGITTKISRGTIEIL 155
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 50.4 bits (115), Expect = 6e-06
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -3
Query: 389 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXX 213
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 166 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 225
Query: 212 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 126
SD+DMGFGLFD
Sbjct: 226 PAAAAAPAKVEAKEESEESDEDMGFGLFD 254
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 695 NTGLGPEKTSXFQALXIPTKISKGXIEII 609
NTGLGPEKTS FQAL I TKIS+G IEI+
Sbjct: 126 NTGLGPEKTSFFQALGITTKISRGTIEIL 154
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = -3
Query: 389 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 249
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 12 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -3
Query: 653 LXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFA 474
L +PT + +G + +++D + K GD + A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 473 PEIXDIKPE 447
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -3
Query: 653 LXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFA 474
L +PT + +G + +++D + K GD + A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 473 PEIXDIKPE 447
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -3
Query: 653 LXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFA 474
L +PT + +G + +++D + K GD + A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 473 PEIXDIKPE 447
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -3
Query: 653 LXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFA 474
L +PT + +G + +++D + K GD + A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 473 PEIXDIKPE 447
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -3
Query: 653 LXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFA 474
L +PT + +G + +++D + K GD + A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 473 PEIXDIKPE 447
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -3
Query: 653 LXIPTKISKGXIEIINDVHILKPGDKVGASXATLLNMLNIFPXSYGLVVKQVYDSGTIFA 474
L +PT + +G + +++D + K GD + A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 473 PEIXDIKPE 447
++ D PE
Sbjct: 216 QQMGDDLPE 224
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,314,361
Number of Sequences: 237096
Number of extensions: 1319069
Number of successful extensions: 2211
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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