Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1525
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.11
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.43
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.43
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 4.0
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 21 7.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 7.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 7.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.2
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.11
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 333 VMNKRNKKYS--RNSWNSIQRWTSPNANSTKVLINIINLKYT*PXVTLYIHC 184
+ N N KY+ N++N+ + N N K+ NIIN++ V + I+C
Sbjct: 323 IHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIYC 374
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.4 bits (53), Expect = 0.43
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 327 NKRNKKYSRNSWNSIQRWTSPNANSTKVLINIINLKYT*PXVTLYIHC 184
+K K S N++N + + N NS K+ NIIN++ V + I+C
Sbjct: 298 SKETKIISSNNYN--YKNYNNNYNSKKLYYNIINIEQIPVPVPVPIYC 343
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.43
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 327 NKRNKKYSRNSWNSIQRWTSPNANSTKVLINIINLKYT*PXVTLYIHC 184
+K K S N++N + + N NS K+ NIIN++ V + I+C
Sbjct: 309 SKETKIISSNNYN--YKNYNNNYNSKKLYYNIINIEQIPVPVPVPIYC 354
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 367 RTSSFQLDHVFHHQDPTVS 423
+ SSF++ H F + DP S
Sbjct: 342 KDSSFRIQHHFFYPDPLAS 360
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 289 QHPEMDFSKCKFN*SLNKYN 230
+ PE + KC FN L K+N
Sbjct: 61 EFPEDEKLKCYFNCVLEKFN 80
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.0
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 291 NSIQRWTSPNANSTKVLI-NIINLKYT*PXVTLYIHC 184
+S+ T N N K L NIIN++ V + IHC
Sbjct: 316 SSLSNNTIHNNNYNKKLYYNIINIEQIPVPVPVPIHC 352
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 351 KWDYLQVMNKRNKKY 307
+WD L V +R+KKY
Sbjct: 200 EWDILGVPAERHKKY 214
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 351 KWDYLQVMNKRNKKY 307
+WD L+V RN++Y
Sbjct: 214 EWDILEVPASRNEEY 228
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -1
Query: 357 RKKWDYLQVMNKRNKKYSRNSWNSIQRWTSPNAN 256
RK +++ R+++YS+ +SI SP+++
Sbjct: 8 RKSLSQRKIIRSRSRRYSKRFSSSIVDRRSPSSS 41
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 120 YSFLRKVHHY 149
Y FL +HHY
Sbjct: 130 YEFLNAIHHY 139
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 120 YSFLRKVHHY 149
Y FL +HHY
Sbjct: 130 YEFLNAIHHY 139
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 120 YSFLRKVHHY 149
Y FL +HHY
Sbjct: 181 YEFLNAIHHY 190
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 120 YSFLRKVHHY 149
Y FL +HHY
Sbjct: 130 YEFLNAIHHY 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 351 KWDYLQVMNKRNKKY 307
+WD L V KRN+ Y
Sbjct: 196 EWDLLGVPGKRNEIY 210
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,707
Number of Sequences: 438
Number of extensions: 2594
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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