Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1521
(600 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2489|AAF49656.2| 1190|Drosophila melanogaster CG7003-PA... 92 5e-19
U17893-1|AAA62406.1| 913|Drosophila melanogaster Spellchecker1 ... 44 2e-04
BT028804-1|ABI34185.1| 917|Drosophila melanogaster RE64551p pro... 40 0.002
AE014134-2491|AAF53392.2| 917|Drosophila melanogaster CG4215-PA... 40 0.002
AE013599-3057|AAF57433.1| 799|Drosophila melanogaster CG11136-P... 32 0.69
AY118711-1|AAM50571.1| 150|Drosophila melanogaster AT25132p pro... 31 1.2
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 31 1.2
AE014296-3253|AAN11642.1| 150|Drosophila melanogaster CG32219-P... 31 1.2
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 31 1.6
AJ564686-1|CAD92839.1| 211|Drosophila melanogaster gag protein ... 28 8.4
>AE014296-2489|AAF49656.2| 1190|Drosophila melanogaster CG7003-PA
protein.
Length = 1190
Score = 92.3 bits (219), Expect = 5e-19
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = -3
Query: 598 HSLVRHLAAHDGLVLGHMACMVETDESVPDSEDHIPEETITFLYKLSPGACPKSYGFNAA 419
H+L+ + LGHMACMVE +++ ++ ET+TFLYK + GACPKSYGFNAA
Sbjct: 1073 HNLIDFFHNDKRITLGHMACMVENEDNADPTQ-----ETVTFLYKYTAGACPKSYGFNAA 1127
Query: 418 RLAGIPKEITRRAHEISKKLEKEAM 344
+LAG+P+ I +RA+E+SKK+E A+
Sbjct: 1128 KLAGMPQGIIKRAYELSKKVEAIAL 1152
>U17893-1|AAA62406.1| 913|Drosophila melanogaster Spellchecker1
protein.
Length = 913
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = -3
Query: 487 ETITFLYKLSPGACPKSYGFNAARLAGIPKEITRRAHEISKKLEKEAMCARAFRDIMKME 308
+ T LY++ PG KS+G ARLA P+ + + A E+ + E E + + D +E
Sbjct: 803 DDFTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFEDEHVDKQKKEDKALLE 862
Query: 307 NNAGGVREL 281
+++L
Sbjct: 863 KIQVAIQQL 871
>BT028804-1|ABI34185.1| 917|Drosophila melanogaster RE64551p protein.
Length = 917
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 487 ETITFLYKLSPGACPKSYGFNAARLAGIPKEITRRAHEISKKLEKEAMCARAFRDIMKME 308
+ T LY++ G KS+G ARLA P+ + + A E+ + E E + + D +E
Sbjct: 807 DDFTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFEDEHVDKQKKEDKALLE 866
Query: 307 NNAGGVREL 281
+++L
Sbjct: 867 KIQVAIQQL 875
>AE014134-2491|AAF53392.2| 917|Drosophila melanogaster CG4215-PA,
isoform A protein.
Length = 917
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 487 ETITFLYKLSPGACPKSYGFNAARLAGIPKEITRRAHEISKKLEKEAMCARAFRDIMKME 308
+ T LY++ G KS+G ARLA P+ + + A E+ + E E + + D +E
Sbjct: 807 DDFTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFEDEHVDKQKKEDKALLE 866
Query: 307 NNAGGVREL 281
+++L
Sbjct: 867 KIQVAIQQL 875
>AE013599-3057|AAF57433.1| 799|Drosophila melanogaster CG11136-PA
protein.
Length = 799
Score = 31.9 bits (69), Expect = 0.69
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 541 CMVETDESVPDSEDHIPEETITFLYKLSPGACPKS 437
C+V E PDSE +I IT L + SPGA P S
Sbjct: 610 CLVMIQEQKPDSELNIGCSNITRLERSSPGAVPVS 644
>AY118711-1|AAM50571.1| 150|Drosophila melanogaster AT25132p
protein.
Length = 150
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 236 NSHSIQQHSNCQCCQQLSNATGIVFHFH 319
N +++ H +C CC +SN G V FH
Sbjct: 22 NHSAVEDHYDCGCCPGISNNNGQVVGFH 49
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 514 GPIRRFLPCTPCARARVHRAPPGVA 588
GP R+ LPC+ A AR APPG+A
Sbjct: 452 GPPRQPLPCSTNASARSAAAPPGIA 476
>AE014296-3253|AAN11642.1| 150|Drosophila melanogaster CG32219-PA
protein.
Length = 150
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 236 NSHSIQQHSNCQCCQQLSNATGIVFHFH 319
N +++ H +C CC +SN G V FH
Sbjct: 22 NHSAVEDHYDCGCCPGISNNNGQVVGFH 49
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 514 GPIRRFLPCTPCARARVHRAPPGVA 588
GP R+ LPC+ A AR APPG+A
Sbjct: 459 GPPRQPLPCSNNASARSATAPPGIA 483
>AJ564686-1|CAD92839.1| 211|Drosophila melanogaster gag protein
protein.
Length = 211
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 514 GPIRRFLPCTPCARARVHRAPPG 582
GP R+ LPC+ A AR APPG
Sbjct: 180 GPSRQPLPCSNNASARSATAPPG 202
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,492,229
Number of Sequences: 53049
Number of extensions: 602134
Number of successful extensions: 1683
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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