Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1520
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0536 - 16875813-16876087,16877023-16877091,16877134-168772...    31   1.4  
07_03_0380 + 17460078-17460782,17461194-17461252,17461388-174614...    28   9.9  

>04_03_0536 -
           16875813-16876087,16877023-16877091,16877134-16877292,
           16877307-16877636,16878764-16879030,16880033-16880077,
           16880159-16880261
          Length = 415

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 202 LHSFVSFIFTTSSLFRGV--ICDRYIFA*KIDVTVDFNSHIVKFL 74
           + S VSF++  SS+   V   C+R I A   D+  + NSH++  L
Sbjct: 336 ISSLVSFVYNESSISDMVAYFCERAILAPTNDIAAEINSHMISQL 380


>07_03_0380 +
           17460078-17460782,17461194-17461252,17461388-17461492,
           17461732-17461867,17461919-17461939
          Length = 341

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 186 VLYLQHHHFFVVLFVIGIYLLKKS 115
           +LY+ HHH  VVL V G+ + K+S
Sbjct: 98  LLYVDHHHSDVVLAVRGMNMAKES 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209,122
Number of Sequences: 37544
Number of extensions: 300993
Number of successful extensions: 328
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)