Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1516
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457278-1|CAG33559.1|  469|Homo sapiens FLJ11200 protein.             35   0.24 
BC010493-1|AAH10493.1|  469|Homo sapiens chromosome 4 open readi...    35   0.24 
AK002062-1|BAA92064.1|  469|Homo sapiens protein ( Homo sapiens ...    35   0.24 

>CR457278-1|CAG33559.1|  469|Homo sapiens FLJ11200 protein.
          Length = 469

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -1

Query: 664 PXFWNKXAHYNXCLPQTRP 608
           P FWNK A+YN CLPQ RP
Sbjct: 449 PDFWNKDAYYNLCLPQ-RP 466


>BC010493-1|AAH10493.1|  469|Homo sapiens chromosome 4 open reading
           frame 20 protein.
          Length = 469

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -1

Query: 664 PXFWNKXAHYNXCLPQTRP 608
           P FWNK A+YN CLPQ RP
Sbjct: 449 PDFWNKDAYYNLCLPQ-RP 466


>AK002062-1|BAA92064.1|  469|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11200 fis, clone PLACE1007725. ).
          Length = 469

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -1

Query: 664 PXFWNKXAHYNXCLPQTRP 608
           P FWNK A+YN CLPQ RP
Sbjct: 449 PDFWNKDAYYNLCLPQ-RP 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,642,597
Number of Sequences: 237096
Number of extensions: 1084114
Number of successful extensions: 1028
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)