Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1515
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-865|AAF47915.2|  585|Drosophila melanogaster CG32242-PA...    44   3e-04
BT024346-1|ABC86408.1|  302|Drosophila melanogaster IP09550p pro...    29   9.3  
AE013599-1398|AAF58577.1|  302|Drosophila melanogaster CG13178-P...    29   9.3  

>AE014296-865|AAF47915.2|  585|Drosophila melanogaster CG32242-PA
           protein.
          Length = 585

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = -1

Query: 638 NGKRINYNYHPIIDFFGEDER-EAEESIDREASELNYVPATEAEWKPINHPQFRNLDVSN 462
           +GKRINYNYHPIIDFF ++ + EA  ++   A E   V   E    P N P+ +   +  
Sbjct: 473 SGKRINYNYHPIIDFFEKNRKAEAAATVSSIAEESRIV---EQRIFPQNSPKSQQNGMGL 529

Query: 461 TVDRKKP*RQIRIPI*ETRE 402
            ++      Q  IP+ +T E
Sbjct: 530 GMETITGVYQHPIPVPKTHE 549


>BT024346-1|ABC86408.1|  302|Drosophila melanogaster IP09550p
           protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
 Frame = -1

Query: 584 DEREAEE----SIDREASELNYVPATEAEWKPINHPQFR 480
           D+RE ++    S+D+ A++LN  PA   + +PIN  QF+
Sbjct: 202 DQRERQQREPNSMDQLAAQLNINPAQSEDLQPINARQFQ 240


>AE013599-1398|AAF58577.1|  302|Drosophila melanogaster CG13178-PA
           protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
 Frame = -1

Query: 584 DEREAEE----SIDREASELNYVPATEAEWKPINHPQFR 480
           D+RE ++    S+D+ A++LN  PA   + +PIN  QF+
Sbjct: 202 DQRERQQREPNSMDQLAAQLNINPAQSEDLQPINARQFQ 240


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,095,061
Number of Sequences: 53049
Number of extensions: 486169
Number of successful extensions: 1044
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)