Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1513
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 72 3e-13
AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p pro... 68 5e-12
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 46 2e-05
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 39 0.003
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 39 0.003
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 39 0.003
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 38 0.006
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro... 36 0.020
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA... 36 0.020
AY069828-1|AAL39973.1| 512|Drosophila melanogaster SD07683p pro... 33 0.18
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 32 0.24
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 32 0.24
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 30 0.99
AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA... 30 0.99
AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p pro... 30 1.3
AF172995-1|AAD48498.1| 1847|Drosophila melanogaster gigas protei... 30 1.3
AE014297-3888|AAF56541.1| 1270|Drosophila melanogaster CG8968-PA... 30 1.3
AE014296-3279|AAF49066.1| 1847|Drosophila melanogaster CG6975-PA... 30 1.3
BT024235-1|ABC86297.1| 1029|Drosophila melanogaster LD05430p pro... 29 1.7
BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p pro... 29 1.7
AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua prot... 29 1.7
AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA... 29 1.7
AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB... 29 1.7
AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC... 29 1.7
AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA... 29 1.7
AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute pr... 29 1.7
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 29 2.3
U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger pr... 29 3.0
BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p pro... 29 3.0
BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p pro... 29 3.0
AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA ... 29 3.0
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 28 4.0
AE014298-686|AAF45990.1| 345|Drosophila melanogaster CG15470-PA... 28 4.0
AY058320-1|AAL13549.1| 414|Drosophila melanogaster GH08941p pro... 28 5.3
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 28 5.3
AE013599-3033|AAF57452.2| 414|Drosophila melanogaster CG13432-P... 28 5.3
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 27 7.0
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 27 7.0
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 27 7.0
BT012673-1|AAT09323.1| 876|Drosophila melanogaster SD07102p pro... 27 7.0
AE014298-1415|AAN09627.1| 183|Drosophila melanogaster CG32691-P... 27 7.0
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 71.7 bits (168), Expect = 3e-13
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = -3
Query: 305 GRLRVGWIMAQVQLQEARPWRCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCTA 126
G + VGW ++ Q+ RP RC RC GH C S VDRS C RCG+ GHKA C A
Sbjct: 389 GVVTVGWSRCRIA-QDVRPIRCFRCLEFGHRAPYCKS-VDRSDCCLRCGEHGHKAKGCVA 446
Query: 125 VPHCVLC 105
P C++C
Sbjct: 447 PPRCLIC 453
>AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p
protein.
Length = 186
Score = 67.7 bits (158), Expect = 5e-12
Identities = 34/66 (51%), Positives = 37/66 (56%)
Frame = -3
Query: 302 RLRVGWIMAQVQLQEARPWRCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCTAV 123
R RVGW ++ E R RC RC GH A C STVDRS CFRCG +GHK A C
Sbjct: 81 RGRVGWSQCLIKELEPRQ-RCFRCLEEGHIAAHCRSTVDRSQCCFRCGTAGHK-AECPKE 138
Query: 122 PHCVLC 105
C LC
Sbjct: 139 AKCFLC 144
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -3
Query: 305 GRLRVGWIMAQVQLQEARPWRCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCTA 126
GR+ + W + + Q R + C RC G H +++C + +C +CGQ GH AA C
Sbjct: 379 GRVYIKWFSFRCRSQ-VRTYACHRCVGFDHKVSECRQ---KESVCRQCGQQGHTAAKCQN 434
Query: 125 VPHCVLC 105
C C
Sbjct: 435 PVDCRNC 441
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGH 147
C +C GH AKC + VD R SGH
Sbjct: 419 CRQCGQQGHTAAKCQNPVDCRNCRHRGQPSGH 450
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSG----LCFRCGQSGHKAATC 132
C RC TGH + CP V+ G C++C ++GH + C
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNC 138
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 245 RCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCTAV--PHCVLCD 102
+C +C GH CP +R C+RC GH + CT P C C+
Sbjct: 56 KCYKCNQFGHFARACPEEAER---CYRCNGIGHISKDCTQADNPTCYRCN 102
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
C +C TGH CP T S C+ CG+SGH C
Sbjct: 125 CYKCNRTGHISKNCPET---SKTCYGCGKSGHLRREC 158
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSG----LCFRCGQSGHKAATC 132
C RC TGH + CP V+ G C++C ++GH + C
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNC 138
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 245 RCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCTAV--PHCVLCD 102
+C +C GH CP +R C+RC GH + CT P C C+
Sbjct: 56 KCYKCNQFGHFARACPEEAER---CYRCNGIGHISKDCTQADNPTCYRCN 102
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
C +C TGH CP T S C+ CG+SGH C
Sbjct: 125 CYKCNRTGHISKNCPET---SKTCYGCGKSGHLRREC 158
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSG----LCFRCGQSGHKAATC 132
C RC TGH + CP V+ G C++C ++GH + C
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNC 138
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 245 RCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCTAV--PHCVLCD 102
+C +C GH CP +R C+RC GH + CT P C C+
Sbjct: 56 KCYKCNQFGHFARACPEEAER---CYRCNGIGHISKDCTQADNPTCYRCN 102
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
C +C TGH CP T S C+ CG+SGH C
Sbjct: 125 CYKCNRTGHISKNCPET---SKTCYGCGKSGHLRREC 158
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 245 RCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
RC C GH C G C+ CGQ GH A C
Sbjct: 355 RCANCNSRGHKADICKKPKREPGSCYACGQLGHLVAQC 392
>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p
protein.
Length = 1358
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 245 RCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
+C CF GH +KCP + +CF CG GH C
Sbjct: 476 KCSNCFEMGHVRSKCPRP-RKPLVCFICGTMGHAEPRC 512
>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
protein.
Length = 1734
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 245 RCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
+C CF GH +KCP + +CF CG GH C
Sbjct: 852 KCSNCFEMGHVRSKCPRP-RKPLVCFICGTMGHAEPRC 888
>AY069828-1|AAL39973.1| 512|Drosophila melanogaster SD07683p
protein.
Length = 512
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 242 CLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGH 147
CL C G H A CPS + C CGQ H
Sbjct: 370 CLNCLGKSHTQASCPSNKN----CLHCGQRHH 397
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = -3
Query: 308 PGRLRVGWIMAQVQLQEARPWRCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGH--KAAT 135
P +R+G+ +V+ P RC +C GH C S C C ++ H
Sbjct: 166 PEIVRIGYETVRVRDYIPLPLRCKKCLRFGHPTPICKSV----ETCINCSETKHTNDGEK 221
Query: 134 CTAVPHCVLC 105
CT +C+ C
Sbjct: 222 CTNEKNCLNC 231
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = -3
Query: 308 PGRLRVGWIMAQVQLQEARPWRCLRCFGTGHGLAKCPSTVDRSGLCFRCGQSGHKAATCT 129
P +L V W +V P RC C GH C + C C + H CT
Sbjct: 182 PSKLTVSWHTVKVSEYIPNPMRCKSCQLLGHTSKHCKN----PPACVSCNLAPHLPVPCT 237
Query: 128 AVPHCVLC 105
+ C C
Sbjct: 238 RI-FCANC 244
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 30.3 bits (65), Expect = 0.99
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 173 CFRCGQSGHKAATCTAVPHCVLC 105
C C + GH + CT P CV+C
Sbjct: 40 CTNCQEYGHTRSYCTLAPVCVVC 62
>AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA
protein.
Length = 660
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 102 ITKYTVRNGGAGGSLVPGLTATETQSAAVDSRRAFSEAMPSTEAPE 239
+T+ + G GG PG T E+ AAV S+R + + STEA +
Sbjct: 475 LTQLPSQGAGLGGGRAPGDTDCESSDAAVPSKR---QRLSSTEAAQ 517
>AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p protein.
Length = 1876
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 203 CPSTVDRSGLCFRCGQSG 150
CPS RSGLC RC Q G
Sbjct: 1038 CPSAPARSGLCERCAQLG 1055
>AF172995-1|AAD48498.1| 1847|Drosophila melanogaster gigas protein
protein.
Length = 1847
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 203 CPSTVDRSGLCFRCGQSG 150
CPS RSGLC RC Q G
Sbjct: 1009 CPSAPARSGLCERCAQLG 1026
>AE014297-3888|AAF56541.1| 1270|Drosophila melanogaster CG8968-PA
protein.
Length = 1270
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 268 NYRRQDLGDASGASVLGMASLNARRLSTAADCVSVAVSPGTRLPPAPPFRTVYFVMRRSG 89
NY++Q S +S +S N +R AA V+PG+RLPP T +M
Sbjct: 661 NYQQQHQNSNSSSS--NSSSSNGQRAQGAAGR-DQGVNPGSRLPPTHSVPTSPLIMPCPP 717
Query: 88 RPTXGLGG-QHVVQPPPQ 38
P Q V PPQ
Sbjct: 718 TPAHSPAAIQGTVTSPPQ 735
>AE014296-3279|AAF49066.1| 1847|Drosophila melanogaster CG6975-PA
protein.
Length = 1847
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 203 CPSTVDRSGLCFRCGQSG 150
CPS RSGLC RC Q G
Sbjct: 1009 CPSAPARSGLCERCAQLG 1026
>BT024235-1|ABC86297.1| 1029|Drosophila melanogaster LD05430p
protein.
Length = 1029
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 390 SPHRMGAVPRAGGHSSSHTSKWEACXHAWKAARRLDHGSGATTGGKTLAMPP 235
SP G P G +H K E + +L++GSG+ +GG ++ PP
Sbjct: 422 SPKGSGGKPEDAGSLQAHI-KQEDIKQEPPSPYKLNNGSGSASGGGVVSAPP 472
>BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p
protein.
Length = 984
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 66 PPSPXVGLPLRRITKYTVRNGGAGGSLVPGLTATETQSAA 185
PP+P + +T + +N AGG+ V G AT Q A+
Sbjct: 67 PPAPGSSVNPTAVTSPSAQNVAAGGATVAGAAATAAQVAS 106
>AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua
protein.
Length = 1403
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 390 SPHRMGAVPRAGGHSSSHTSKWEACXHAWKAARRLDHGSGATTGGKTLAMPP 235
SP G P G +H K E + +L++GSG+ +GG ++ PP
Sbjct: 796 SPKGSGGKPEDAGSLQAHI-KQEDIKQEPPSPYKLNNGSGSASGGGVVSAPP 846
>AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA
protein.
Length = 1403
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 390 SPHRMGAVPRAGGHSSSHTSKWEACXHAWKAARRLDHGSGATTGGKTLAMPP 235
SP G P G +H K E + +L++GSG+ +GG ++ PP
Sbjct: 796 SPKGSGGKPEDAGSLQAHI-KQEDIKQEPPSPYKLNNGSGSASGGGVVSAPP 846
>AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB,
isoform B protein.
Length = 950
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 66 PPSPXVGLPLRRITKYTVRNGGAGGSLVPGLTATETQSAA 185
PP+P + +T + +N AGG+ V G AT Q A+
Sbjct: 33 PPAPGSSVNPTAVTSPSAQNVAAGGATVAGAAATAAQVAS 72
>AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC,
isoform C protein.
Length = 984
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 66 PPSPXVGLPLRRITKYTVRNGGAGGSLVPGLTATETQSAA 185
PP+P + +T + +N AGG+ V G AT Q A+
Sbjct: 67 PPAPGSSVNPTAVTSPSAQNVAAGGATVAGAAATAAQVAS 106
>AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA,
isoform A protein.
Length = 984
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 66 PPSPXVGLPLRRITKYTVRNGGAGGSLVPGLTATETQSAA 185
PP+P + +T + +N AGG+ V G AT Q A+
Sbjct: 67 PPAPGSSVNPTAVTSPSAQNVAAGGATVAGAAATAAQVAS 106
>AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute
protein protein.
Length = 950
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 66 PPSPXVGLPLRRITKYTVRNGGAGGSLVPGLTATETQSAA 185
PP+P + +T + +N AGG+ V G AT Q A+
Sbjct: 33 PPAPGSSVNPTAVTSPSAQNVAAGGATVAGAAATAAQVAS 72
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 173 CFRCGQSGHKAATCTAVPHCVLCD 102
CF CG HK CT C C+
Sbjct: 268 CFNCGSREHKRKDCTLPTKCFSCN 291
>U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger
protein protein.
Length = 296
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 221 GHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
G G K P+ ++ C++CG GH A C
Sbjct: 253 GPGFVKVPTPLEEI-TCYKCGNKGHYANKC 281
>BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p
protein.
Length = 320
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 221 GHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
G G K P+ ++ C++CG GH A C
Sbjct: 277 GPGFVKVPTPLEEI-TCYKCGNKGHYANKC 305
>BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p
protein.
Length = 296
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 221 GHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
G G K P+ ++ C++CG GH A C
Sbjct: 253 GPGFVKVPTPLEEI-TCYKCGNKGHYANKC 281
>AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA
protein.
Length = 296
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 221 GHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
G G K P+ ++ C++CG GH A C
Sbjct: 253 GPGFVKVPTPLEEI-TCYKCGNKGHYANKC 281
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.3 bits (60), Expect = 4.0
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 191 VDRSGLCFRCGQSGHKAATCTAVPHCVLC 105
+ + LC C GH+ CT++ C C
Sbjct: 458 IKKKQLCLNCFARGHQLRDCTSMHSCFTC 486
>AE014298-686|AAF45990.1| 345|Drosophila melanogaster CG15470-PA
protein.
Length = 345
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 347 LPATPPSGKPAXTPGRLRVGWIMAQVQLQ 261
L ATPPS K TP + I AQ Q+Q
Sbjct: 210 LMATPPSRKEPLTPAHPQAASIQAQAQVQ 238
>AY058320-1|AAL13549.1| 414|Drosophila melanogaster GH08941p
protein.
Length = 414
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 288 LDHGSGATTGGKTLAMPPVLRYWAW 214
L GSGA + G +LA+ +L W+W
Sbjct: 387 LSAGSGAASNGLSLALWTILGAWSW 411
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 173 CFRCGQSGHKAATCTAVPHCVLC 105
C RC Q GH A C CV C
Sbjct: 287 CHRCQQIGHTAKYCRKAHICVKC 309
>AE013599-3033|AAF57452.2| 414|Drosophila melanogaster CG13432-PA
protein.
Length = 414
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 288 LDHGSGATTGGKTLAMPPVLRYWAW 214
L GSGA + G +LA+ +L W+W
Sbjct: 387 LSAGSGAASNGLSLALWTILGAWSW 411
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 173 CFRCGQSGHKAATCTAVPHCVLC 105
C C + GH A CT CV+C
Sbjct: 384 CTNCQEYGHTKAYCTLKSVCVVC 406
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 11/55 (20%)
Frame = -3
Query: 263 QEARPWRCLRCFGTGHGLAKCPSTV----------DRSGL-CFRCGQSGHKAATC 132
++A P C C G +A+C S + ++S + C+RCGQ GH + C
Sbjct: 204 RKASPVVCHFCSKPGRRIAECRSKMRQDRRAKPQREKSNVTCYRCGQPGHFSNQC 258
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 173 CFRCGQSGHKAATCTAVPHCVLC 105
C C + GH A CT CV+C
Sbjct: 228 CTNCQEYGHTKAYCTLKSVCVVC 250
>BT012673-1|AAT09323.1| 876|Drosophila melanogaster SD07102p
protein.
Length = 876
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 221 GHGLAKCPSTVDRSGLCFRCGQSGHKAATC 132
GH +KCP + +CF CG GH C
Sbjct: 2 GHVRSKCPRP-RKPLVCFICGTMGHAEPRC 30
>AE014298-1415|AAN09627.1| 183|Drosophila melanogaster CG32691-PA
protein.
Length = 183
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 378 MGAVPRAGGHSSSHTSKWEACXHAWKAARRLDHGSGATTGGKTLAMPPVLRY 223
+G + A G ++SHT + C H W R+ H + G PP+ RY
Sbjct: 59 IGVLADAAG-AASHTHPAQLCHHLWFCMFRVQHIAKCWQYGHA---PPLFRY 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,498,087
Number of Sequences: 53049
Number of extensions: 580532
Number of successful extensions: 2691
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2668
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -