Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1512
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 140 5e-34
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 126 8e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 97 6e-21
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 86 2e-17
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 85 4e-17
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 83 1e-16
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 83 1e-16
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 39 0.003
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 36 0.015
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 32 0.24
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 32 0.24
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 0.95
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 30 1.3
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.3
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 1.3
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 1.3
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.2
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 28 3.9
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 28 3.9
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 28 3.9
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 5.1
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 28 5.1
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 28 5.1
AC024849-4|AAL27260.2| 152|Caenorhabditis elegans Hypothetical ... 25 6.6
Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 27 6.7
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 27 6.7
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 27 6.7
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 27 6.7
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 27 6.7
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 27 6.7
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 27 6.7
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 6.7
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 27 8.9
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 27 8.9
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 27 8.9
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein. 27 8.9
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 27 8.9
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 27 8.9
AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable abno... 27 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 140 bits (340), Expect = 5e-34
Identities = 64/110 (58%), Positives = 82/110 (74%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTMXXXXXXXXX 370
ITN KG LSK +IERMVNEAEKY+ +D QK+ I AKN LESY F++K T+
Sbjct: 504 ITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKI 563
Query: 369 XDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
DK+ I DKC++ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 564 SPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 126 bits (305), Expect = 8e-30
Identities = 58/110 (52%), Positives = 77/110 (70%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTMXXXXXXXXX 370
ITN K SK +IERMVNEAEKY+ +D QK+ I AKN LESY F++K T+
Sbjct: 504 ITNDKDRFSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKI 563
Query: 369 XDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
DK+ I DKC++ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 564 SPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 97.5 bits (232), Expect = 6e-21
Identities = 46/110 (41%), Positives = 68/110 (61%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTMXXXXXXXXX 370
I N KG LS+ +I+RMVNEA+++ ED Q++ I ++N LE+Y F +K +
Sbjct: 504 IRNEKGRLSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQVKQALEEHGSLLSA 563
Query: 369 XDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
D + D DT++W++ N LADK+E E K KEL+ IC I+TKM+Q
Sbjct: 564 E--DAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/110 (40%), Positives = 70/110 (63%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTMXXXXXXXXX 370
I N KG L++ +I+RMV+EA+++ ED +Q+E + A+N LE+Y F +K +
Sbjct: 504 IQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQALDEYSSKLST 563
Query: 369 XDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
D + ++T++WLDSN LA+K+E E K KEL+ +C I+TKM+Q
Sbjct: 564 E--DASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/110 (40%), Positives = 70/110 (63%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTMXXXXXXXXX 370
I N KG L++ +I+RMV+EA+++ ED +Q+E + A+N LE+Y F +K +
Sbjct: 504 IQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQALDEYSSKLST 563
Query: 369 XDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
D + ++T++WLDSN LA+K+E E K KEL+ +C I+TKM+Q
Sbjct: 564 E--DASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 85.8 bits (203), Expect = 2e-17
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTM-XXXXXXXX 373
ITN + LS +IERM+N+AEK+ +D K K+ A+N LESY +++K+ +
Sbjct: 531 ITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGK 590
Query: 372 XXDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
+ DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 591 LDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 84.6 bits (200), Expect = 4e-17
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTM-XXXXXXXX 373
ITN LS +IERM+N+A+K+ +D QKE + ++N LE+Y + MK+ +
Sbjct: 528 ITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGK 587
Query: 372 XXDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 223
D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 588 LTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTM-XXXXXXXX 373
ITN + LS +IE M+N+AEK+ +D K K+ A+N LESY +++K+ +
Sbjct: 531 ITNDQNRLSPEDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGK 590
Query: 372 XXDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 220
+ DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 591 LDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 83.0 bits (196), Expect = 1e-16
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTM-XXXXXXXX 373
ITN LS +IERM+N+A+K+ +D QKE + ++N LE+Y + +K+ +
Sbjct: 159 ITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQIKTQIADKEKLGGK 218
Query: 372 XXDXDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 223
D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 219 LTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 549 ITNXKGXLSKXEIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTM 397
+ G LSK +IE M+ EAEK ED K+KE + N E ++ M
Sbjct: 525 VIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAEGIIHDTEAKM 575
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -2
Query: 516 EIERMVNEAEKYRNEDXKQKETIXAKNALESYCFSMKSTMXXXXXXXXXXDXDKQTILDK 337
++++ N + + D ++K AKN+LE Y + M+ + +
Sbjct: 552 DVQKFHNLELQMQESDAREKAKADAKNSLEEYVYEMRDKVSDQYAEFITPAAADE-FRSV 610
Query: 336 CNDTIKWL-DSNQLADKEEYEHKQKELEGICNPIITK 229
T WL D + A+++ YE + EL+ + P++ +
Sbjct: 611 LTSTEDWLYDEGEDAERDVYEKRLSELKAVGTPVVER 647
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 176 EHPEPEVPPPGLEALAPPSRRSIKPTF 96
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 176 EHPEPEVPPPGLEALAPPSRRSIKPTF 96
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 215 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPT 75
P P + +A P P PPP L+A PP +K + + PT
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 188 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 87
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 188 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 87
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 206 SPEVCRASRAEH-PEPEVPPPGLEALAPP 123
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 206 SPEVCRASRAEH-PEPEVPPPGLEALAPP 123
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 224 TRVPEESPEVCRASRAEHPEPE---VPPPGLEALAPPSRRSI 108
+R P SP ++ HP P + PPGLE L+ R+ I
Sbjct: 1408 SRQPSRSPSFVNPQQSFHPIPSFEPIVPPGLEDLSEEERQKI 1449
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 215 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKP 78
P E P ++ P P PP PP+RR P TR+P
Sbjct: 223 PSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRP 268
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +3
Query: 69 VTGRFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 221
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +3
Query: 69 VTGRFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 221
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +3
Query: 69 VTGRFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 221
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 182 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 87
R E P P P G + A +RR I+P+ TT
Sbjct: 308 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 339
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 182 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 87
R E P P P G + A +RR I+P+ TT
Sbjct: 551 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 582
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 188 ASRAEHPEPEVPPPGLEALAPPSRRSIKPTF-HTTRKPTCNNHL 60
AS + P P P + + +R+ +KPT ++T++ T NN++
Sbjct: 37 ASTSSAAPPAPPKPVIPVMFSQNRQPMKPTMNNSTKQSTINNYI 80
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 188 ASRAEHPEPEVPPPGLEALAPPSRRSIKPTF-HTTRKPTCNNHL 60
AS + P P P + + +R+ +KPT ++T++ T NN++
Sbjct: 38 ASTSSAAPPAPPKPVIPVMFSQNRQPMKPTMNNSTKQSTINNYI 81
>AC024849-4|AAL27260.2| 152|Caenorhabditis elegans Hypothetical
protein Y67D8B.5 protein.
Length = 152
Score = 24.6 bits (51), Expect(2) = 6.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = -3
Query: 218 VPEESPEVCRASRAEH---PEPEVPPP 147
V EE P++ + ++ E PEP PPP
Sbjct: 37 VVEEDPKISKQAKMEKKDGPEPPPPPP 63
Score = 21.4 bits (43), Expect(2) = 6.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 170 PEPEVPPPGLEALAPPSRRSIKPTFHTTRKPT 75
PEP P A PSR S + + + KP+
Sbjct: 67 PEPAPQVPSQAAGPDPSRLSKRSSRQSANKPS 98
>Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical
protein W07G1.3 protein.
Length = 307
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 191 RASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTSP 48
R + PEP VPP APP+ S+ P F + + HL++ P
Sbjct: 23 RKRSSSKPEPPVPPK----FAPPAAPSVAPNFRAS--DSAAPHLLSVP 64
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 292 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 328
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 318 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 354
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 292 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 328
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 318 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 354
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 159 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 195
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 292 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 328
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 219 PGTSSLLSDCKCLPILSACAHTPPCRPVGWNPAT*WC 329
P S L S C+P++S + P V T WC
Sbjct: 318 PLCSRLSSTSNCIPVMSTALQSSPVAEVNRGHLTHWC 354
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 233 RRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 99
R R+ E EV P + PPPG++ +P +R+ PT
Sbjct: 207 RHQPRMYHEDVEVRVDEMPMWPMNDSPPPGMQQQSPERQRAFSPT 251
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 233 RRCTRVPEESPEVCRASRAEHPEPEV---PPPGLEALAPPSRRSIKPTFHTTRKPTCNNH 63
R+ TR P++ + A + PPP + + PS + T HTT PT N+
Sbjct: 1318 RKVTRAPKKQTSRSKKESASNSRDSTHLTPPPSDGSTSTPSPQHFMNTTHTT--PTSLNY 1375
Query: 62 L 60
L
Sbjct: 1376 L 1376
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 233 RRCTRVPEESPEVCRASRAEHPEPEV---PPPGLEALAPPSRRSIKPTFHTTRKPTCNNH 63
R+ TR P++ + A + PPP + + PS + T HTT PT N+
Sbjct: 1318 RKVTRAPKKQTSRSKKESASNSRDSTHLTPPPSDGSTSTPSPQHFMNTTHTT--PTSLNY 1375
Query: 62 L 60
L
Sbjct: 1376 L 1376
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 215 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTSP 48
P P+ R + P +PPPG +P R I P+ H V P
Sbjct: 101 PNVMPDRVAGPRIINAIPGLPPPGFIFQSPAFARMIPGNVEIPTPPSQTQHTVVHP 156
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 215 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTSP 48
P P+ R + P +PPPG +P R I P+ H V P
Sbjct: 101 PNVMPDRVAGPRIINAIPGLPPPGFIFQSPAFARMIPGNVEIPTPPSQTQHTVVHP 156
>AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein.
Length = 1040
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 185 SRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTS 51
S + P P+ P E + P S S PT H +KP + S
Sbjct: 360 STSTSPPPQAPASAFEPVKPLSNGSPSPT-HQVQKPIVTRSIAVS 403
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 221 RVPEESPEV-CRASRAEHPEPEVPPPGLEALAPP-SRRSIKPT 99
++P SP A+R + PE +P P A +PP SRRS+ T
Sbjct: 341 QLPRNSPAANATAAREDAPEASIPAP---APSPPASRRSVSRT 380
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 221 RVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTSP 48
+V E +P A A P P PPP + P S+ ++ + + KP+ + + +P
Sbjct: 160 KVEEPAPAPAPAPAAVAPAPP-PPPEPAVVQPESQAGVESIYLDSGKPSYDAQVQNAP 216
>AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable
abnormal morphology protein19 protein.
Length = 1040
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 185 SRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTS 51
S + P P+ P E + P S S PT H +KP + S
Sbjct: 360 STSTSPPPQAPASAFEPVKPLSNGSPSPT-HQVQKPIVTRSIAVS 403
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,633,054
Number of Sequences: 27780
Number of extensions: 199625
Number of successful extensions: 970
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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