Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1505
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122262-1|AAM52774.1| 1544|Drosophila melanogaster SD13096p pro...    30   2.9  
AE014134-2941|AAF53675.2| 1365|Drosophila melanogaster CG10231-P...    30   2.9  
BT001875-1|AAN71647.1|  358|Drosophila melanogaster SD09244p pro...    29   8.9  
BT001871-1|AAN71643.1|  358|Drosophila melanogaster SD05793p pro...    29   8.9  
AE014297-2599|AAN13793.1|  406|Drosophila melanogaster CG17836-P...    29   8.9  
AE014297-2598|AAN13792.1|  406|Drosophila melanogaster CG17836-P...    29   8.9  
AE014297-2597|AAN13791.1|  668|Drosophila melanogaster CG17836-P...    29   8.9  
AE014297-2596|AAF55608.2|  668|Drosophila melanogaster CG17836-P...    29   8.9  

>AY122262-1|AAM52774.1| 1544|Drosophila melanogaster SD13096p protein.
          Length = 1544

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 732  RSHSGPHHAMARRSRATNQ*SRYGNISHSHNTTARHPYY 616
            ++ +G H A+ + +   N  S + N SHSHN    H ++
Sbjct: 1400 KTRNGTHAALCKSTPVINNHSHHHNHSHSHNHNHNHHHH 1438


>AE014134-2941|AAF53675.2| 1365|Drosophila melanogaster CG10231-PA
            protein.
          Length = 1365

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 732  RSHSGPHHAMARRSRATNQ*SRYGNISHSHNTTARHPYY 616
            ++ +G H A+ + +   N  S + N SHSHN    H ++
Sbjct: 1223 KTRNGTHAALCKSTPVINNHSHHHNHSHSHNHNHHHHHH 1261


>BT001875-1|AAN71647.1|  358|Drosophila melanogaster SD09244p
           protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 722 PAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGSS 549
           PAP    P    +L+ ++ TE   +A    P  P  +     DD +EA T+   T +S
Sbjct: 118 PAPVESQPTKRSRLMLQIKTE---LAPAFSPTTPEIINQLLNDDRFEAPTTSTSTSTS 172


>BT001871-1|AAN71643.1|  358|Drosophila melanogaster SD05793p
           protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 722 PAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGSS 549
           PAP    P    +L+ ++ TE   +A    P  P  +     DD +EA T+   T +S
Sbjct: 118 PAPVESQPTKRSRLMLQIKTE---LAPAFSPTTPEIINQLLNDDRFEAPTTSTSTSTS 172


>AE014297-2599|AAN13793.1|  406|Drosophila melanogaster CG17836-PD,
           isoform D protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 722 PAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGSS 549
           PAP    P    +L+ ++ TE   +A    P  P  +     DD +EA T+   T +S
Sbjct: 166 PAPVESQPTKRSRLMLQIKTE---LAPAFSPTTPEIINQLLNDDRFEAPTTSTSTSTS 220


>AE014297-2598|AAN13792.1|  406|Drosophila melanogaster CG17836-PC,
           isoform C protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 722 PAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGSS 549
           PAP    P    +L+ ++ TE   +A    P  P  +     DD +EA T+   T +S
Sbjct: 166 PAPVESQPTKRSRLMLQIKTE---LAPAFSPTTPEIINQLLNDDRFEAPTTSTSTSTS 220


>AE014297-2597|AAN13791.1|  668|Drosophila melanogaster CG17836-PB,
           isoform B protein.
          Length = 668

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 722 PAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGSS 549
           PAP    P    +L+ ++ TE   +A    P  P  +     DD +EA T+   T +S
Sbjct: 428 PAPVESQPTKRSRLMLQIKTE---LAPAFSPTTPEIINQLLNDDRFEAPTTSTSTSTS 482


>AE014297-2596|AAF55608.2|  668|Drosophila melanogaster CG17836-PA,
           isoform A protein.
          Length = 668

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 722 PAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGSS 549
           PAP    P    +L+ ++ TE   +A    P  P  +     DD +EA T+   T +S
Sbjct: 428 PAPVESQPTKRSRLMLQIKTE---LAPAFSPTTPEIINQLLNDDRFEAPTTSTSTSTS 482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,640,490
Number of Sequences: 53049
Number of extensions: 568980
Number of successful extensions: 1572
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)