Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1504
(530 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 31 0.14
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 28 1.00
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 27 1.7
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 2.3
SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces pomb... 27 2.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 5.3
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 5.3
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 7.0
SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces pom... 25 7.0
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 25 9.3
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 25 9.3
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 294 APYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTM 181
+PY PLS TP TA +++S + ESNR + TM
Sbjct: 567 SPYEPPLSVTPSTAITNLS-IPESNRTNSSASSKSFTM 603
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 27.9 bits (59), Expect = 1.00
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 303 GPMTSPVGTGETIIQNIFCDLVALP 377
GP +PVG G TI+ I C ++ +P
Sbjct: 489 GPSYAPVGWGSTILGVISCIMIPIP 513
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -3
Query: 378 QAMRPNHKRCFG*WFHLSRRARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVH 199
QA H RC +F LSR+ P PY + P P + R ++ + +
Sbjct: 494 QASVSTHTRCIWDYF-LSRKDEFKNPNYVPYDDVIMPDPSSLRWWSASFAQPDENMNIPS 552
Query: 198 PGRS 187
P S
Sbjct: 553 PSES 556
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = -3
Query: 333 HLSRRARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIRSCATIP 154
H S S + T +P LS P++ +SIS V+ R R T S + P
Sbjct: 816 HASGSRNSISSTKSPQHK-LSDQPRSRNNSISNVSHRERSNSVSSKSRETRTSASNESDP 874
Query: 153 KK 148
KK
Sbjct: 875 KK 876
>SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 467 LMVFPTXFRVLQGLYFDEETSNCDWKEVV---NRQCDQITKDVLD 342
L +FPT R+ Y+DE + + V N C++IT+ +D
Sbjct: 95 LSIFPTKERITSPFYWDENKKDALLRGTVLESNEDCNEITQLWID 139
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 403 TATGKK*STGNATKSQKMFWMMVSPVPT 320
T TG +TG+AT S F+ S +PT
Sbjct: 276 TTTGSTTTTGSATVSSSPFYSNSSVIPT 303
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 336 FHLSRRARSWAPTAAPYPTPLSPTPKTARSSISAVTES 223
++L+ A WA A YP S T T+ S+ S T S
Sbjct: 729 WYLAYAAGLWANDAVYYPVSSSSTTTTSTSTGSVTTTS 766
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAV 232
APTA P+P SP+P + + AV
Sbjct: 554 APTAMPHPNITSPSPSISVTQRPAV 578
>SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 398 DWKEVVNRQCDQITKDVLDDGFTCP 324
+WK+ + R C + ++ D F CP
Sbjct: 289 EWKKPICRYCIDLRSCLVCDSFVCP 313
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 24.6 bits (51), Expect = 9.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 303 GPMTSPVGTGETIIQNIFCDLVALP 377
GP +PV G TI+ + C ++ +P
Sbjct: 489 GPSYAPVAWGSTILGIVACLMIPIP 513
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 24.6 bits (51), Expect = 9.3
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -2
Query: 382 STGNATKSQKMFWMMVSPVPTGEVMGPNGRSLPHPTFPHPEDCQKFYICRNG 227
+T N T+ QK S VP G + LP P D Y+ RNG
Sbjct: 12 TTNNETEHQKSITDQSSSVPAGVI-------LPPPAIREIIDKSASYVARNG 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,089,563
Number of Sequences: 5004
Number of extensions: 41376
Number of successful extensions: 141
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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