Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1504
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283 32 0.33
09_04_0296 + 16461482-16461544,16462087-16463097 31 0.58
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 30 1.0
03_02_0328 - 7487759-7488340 30 1.0
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 30 1.0
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 30 1.3
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 29 2.3
10_08_0322 + 16736013-16736072,16737200-16737305,16737436-167375... 28 4.1
08_01_0947 + 9399366-9399568,9399683-9399855,9400745-9401130,940... 28 4.1
07_03_1080 + 23815232-23817040 28 4.1
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 28 4.1
01_05_0611 - 23644692-23646439,23647011-23647551,23648851-236489... 28 4.1
10_08_0401 + 17629912-17630376 28 5.4
07_03_1775 + 29431106-29431193,29431290-29431329,29431620-294320... 28 5.4
06_03_1304 - 29187930-29188273,29188926-29189039,29189453-291897... 28 5.4
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 28 5.4
12_01_0442 + 3495333-3496484 27 7.1
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 27 7.1
06_03_0178 + 17594062-17595576 27 7.1
04_04_1545 - 34278266-34278586,34278685-34279114,34279225-342793... 27 7.1
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283... 27 7.1
08_02_0028 - 11371547-11371657,11372326-11372518,11372738-113728... 27 9.4
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470... 27 9.4
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79... 27 9.4
06_03_0606 - 22689935-22689998,22690716-22691159,22691669-226920... 27 9.4
05_04_0146 + 18393447-18394043 27 9.4
04_03_1017 + 21747044-21748051 27 9.4
04_01_0003 + 79564-79698,79879-79956,81025-81388,82399-82437,825... 27 9.4
03_05_0429 - 24157060-24157671,24158000-24158468,24158679-241587... 27 9.4
03_04_0243 + 19298293-19299117 27 9.4
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 27 9.4
01_06_0513 - 29944888-29945943 27 9.4
>09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283
Length = 205
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 324 RRARSWAPTAAPYPTPLSPTPKTARSSIS-AVTESNRKREAVHPGRSTMRIRSCATIPK 151
R AR P AA P P +PTPK +S + + + AV G IR C K
Sbjct: 60 RSARPSTPPAACQPEPPAPTPKAPNTSTALVIAGGGAAKIAVGAGGGAASIRYCPCCKK 118
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTESNRK---REAVH--PGRSTMRI-RSCATIPKKL 145
APTA P P P P+ S +A T SN K R +V PG T + R + + L
Sbjct: 244 APTAVPLPPASPPVPQPPCMSAAATTTSNTKASERRSVRFCPGAETSVVRRRVEELVRSL 303
Query: 144 LDVK 133
DV+
Sbjct: 304 ADVE 307
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 324 RRARSW-APTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMR 178
R ARS +P + P P+ SPTP ++ S+ SA S+R A PG ++ R
Sbjct: 60 REARSGRSPRSVP-PSRRSPTPSSSPSTASAAARSSRTPSAA-PGGTSAR 107
>03_02_0328 - 7487759-7488340
Length = 193
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 291 PYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIRSCATIPKKLLD 139
PYP P P++ R+S + + +R+R+ P ST + T KK L+
Sbjct: 57 PYPPPPQQPPRSGRASTPSTRQRDRRRKPSRPPPSTETTKG-GTQKKKPLE 106
>01_07_0306 +
42638683-42638990,42639074-42639314,42639935-42640236,
42640431-42640607,42640853-42641617,42641697-42641791,
42641889-42641951,42642047-42642135,42642229-42642324,
42642457-42643104,42643596-42643628,42643838-42643912,
42644442-42644603,42644604-42644674,42644758-42644815,
42645196-42645394,42645487-42645552,42645699-42646183
Length = 1310
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 261 KTARSSISAVTESNRKREAVHPGRSTMRIRSCATIPKKLLD 139
K +R + E R GR+TM ++ CA++P++ LD
Sbjct: 538 KKSRILLKEELEDGSIRRQGRSGRNTMHVKGCASMPREKLD 578
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -3
Query: 318 ARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIRS 169
A + APT+AP+ T LS A + S V+ S ++R + PG S R R+
Sbjct: 847 ANAGAPTSAPFKTELS---ALASYTPSGVSGSGKRRFSEAPGHSQYRDRA 893
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 327 SRRARSWAPTAAPYPTPLSPTPKT-ARSSISAVTESNRKREAVHPGRSTMRIRSC 166
S A APTAAP+P P P P+T + +S S+ + + PG T SC
Sbjct: 56 SSAAAPVAPTAAPWP-PSPPPPRTPSAASTSSCRPTVAPAVPLPPGSQTSLHLSC 109
>10_08_0322 +
16736013-16736072,16737200-16737305,16737436-16737584,
16738344-16738596,16738928-16739037,16739302-16739376,
16739477-16739563,16739754-16739840,16740021-16740158,
16740438-16740503
Length = 376
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 339 WFHLSRRARSWAPTAAPYPTPLSPTPKTARSSI 241
W++ S R APT P P P P PK A+ +
Sbjct: 284 WWYQSAEERMSAPTVYP-PPPPPPLPKVAKDGL 315
>08_01_0947 +
9399366-9399568,9399683-9399855,9400745-9401130,
9401791-9402090,9402177-9402266,9403213-9403336,
9403452-9403615,9404572-9404802
Length = 556
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -3
Query: 309 WAPTAAPYPTPLSPTPKTARSSISAVTES--NRKREAVHPGRSTMRIRSCATIP 154
W PT A P P P ++ S +S S R R A S R R A++P
Sbjct: 11 WLPTRARAPPPPPPRAPSSASPVSGAPASLRFRGRRAASASASAARRRRGASLP 64
>07_03_1080 + 23815232-23817040
Length = 602
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 336 FHLSRRARSWAPTAAPYPTPLSPTPKTARSSISA 235
FH R + P A+ PT +PTP + SS +A
Sbjct: 111 FHHGARVQQQQPPASSTPTGTAPTPPLSTSSTAA 144
>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 336 FHLSRRARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKRE 208
F L+ R R+ +P AP P P P + + SA + ++RE
Sbjct: 968 FTLAPRQRASSPMKAPPPPPKRDVPHNEKGAPSAEKDVQQRRE 1010
>01_05_0611 -
23644692-23646439,23647011-23647551,23648851-23648952,
23649244-23649441
Length = 862
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 339 WFHLSRRARSWAPTAAPYPTPLSPTPKTARSSISAV 232
WF + RR ++ + Y ++PT T R++ SA+
Sbjct: 91 WFRIGRRTTAFPDSRKAYQKMIAPTLLTQRATASAI 126
>10_08_0401 + 17629912-17630376
Length = 154
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 339 WFHLSRRAR-SWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMR 178
+FH S RAR A AAP +P + R S ++V ++++ V P R R
Sbjct: 45 FFHPSERARRGHAAGAAPALSPRAAPRGQLRESAASVARADQEEGGVAPARKVGR 99
>07_03_1775 +
29431106-29431193,29431290-29431329,29431620-29432080,
29432173-29432363,29432503-29432635,29432839-29433428
Length = 500
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -3
Query: 387 SSQQAMRPNHKRCFG*WFHLSRRARSWAPTAAPYPTPLSPTPKTARSSISAVT 229
S +QA +H R G H R A + AP+ AP P+P + PK+A S +A+T
Sbjct: 72 SPKQAPPHHHNRHGG---H-HRAAHTPAPSPAPSPSPFTAPPKSA--SPAAIT 118
>06_03_1304 -
29187930-29188273,29188926-29189039,29189453-29189722,
29190098-29190234,29190483-29191159
Length = 513
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 373 NATKSQKMFWMMVSPVPTGEVMGPNGRSLPHP 278
N + +FW +P P G N +S+PHP
Sbjct: 7 NWNQKSPVFWDWENPAPFGPNTMENPKSIPHP 38
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = -2
Query: 301 NGRSLPHPTFPHPEDCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYYD 122
N S P P P C + + ++ V K PS + + CD P+K++ E+ +
Sbjct: 38 NVESRPLPGSPSQSCCIQPNLAKDCVNYLKSGLPSRIAFYKQGAWCDFPQKIM--ESLVE 95
Query: 121 GQPLDKN 101
G DK+
Sbjct: 96 GFKADKS 102
>12_01_0442 + 3495333-3496484
Length = 383
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTES---NRKREAVHPG 193
AP AP P P P P+ A ++ RKR VH G
Sbjct: 212 APPTAPAPAPPPPPPQPASPKTKTKAKAKKPKRKRSCVHCG 252
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 309 WAPTAAPYPTP--LSPTPKTARSSI 241
WA TAAP P P + PTP A + +
Sbjct: 711 WASTAAPSPAPSAVGPTPAAAAAEL 735
>06_03_0178 + 17594062-17595576
Length = 504
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 315 RSWAPTAAPY-PTPLSPTPKTARSSISA 235
R +P+ AP P P SPTP +A +S SA
Sbjct: 10 RHLSPSPAPSTPRPSSPTPSSASASASA 37
>04_04_1545 -
34278266-34278586,34278685-34279114,34279225-34279322,
34279415-34279517,34279609-34279694,34279778-34279865,
34279950-34280063,34280147-34280235,34280369-34280484,
34280906-34280951
Length = 496
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 285 GKERPLGPMTSPVGTGETIIQNIFCDLVALPVDYF--FPVAVGGLF 416
G P+ + S GT + + CDLV P D + F VG LF
Sbjct: 386 GATEPVQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFCAPVGNLF 431
>04_03_1028 -
21827961-21827972,21828018-21828112,21828286-21828361,
21828921-21829037,21829532-21829621,21830011-21830056,
21831407-21831502,21831599-21832008
Length = 313
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 318 ARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIRSCA 163
A S +P P LSPTP R S + + S R+ + RS R RS +
Sbjct: 39 AGSPSPPLPPRKRRLSPTPSPTRRSSRSRSRSPRRGRSRSRSRSRSRGRSAS 90
>08_02_0028 -
11371547-11371657,11372326-11372518,11372738-11372814,
11373498-11373608,11374533-11374659,11374745-11375022
Length = 298
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = -2
Query: 322 TGEVMGPNGRS-LPHP 278
TGE +GPNGRS LP P
Sbjct: 220 TGEAVGPNGRSWLPSP 235
>08_01_0541 +
4702930-4703328,4703411-4703506,4703601-4703649,
4703771-4703865
Length = 212
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTE 226
+P AAP +P+SP A +S+S V +
Sbjct: 68 SPLAAPASSPISPYASPASASVSTVAD 94
>08_01_0107 -
789217-789984,790070-790219,790303-790890,790968-791093
Length = 543
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 315 RSWAPTAAPYPTPLSPTPKTARSSISAVTESNR 217
+S +P+ AP PTP P + +S +AVTE R
Sbjct: 54 KSSSPSPAP-PTPPPPQQQQQQSRAAAVTEEQR 85
>06_03_0606 - 22689935-22689998,22690716-22691159,22691669-22692057,
22692130-22692223,22692507-22692599,22692705-22692913,
22692999-22693833,22693948-22694038,22698069-22698892,
22699384-22700489,22701353-22701415
Length = 1403
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = -3
Query: 309 WAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIR 172
+ P P P PLS P TAR SI +RE V G S+ RI+
Sbjct: 1129 YQPRRLPPPLPLSARPSTARHSIRI-----EEREGV-GGSSSSRIK 1168
>05_04_0146 + 18393447-18394043
Length = 198
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = -3
Query: 309 WAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIRSCAT 160
WAP+ A T + P A + ++A + + GRST + T
Sbjct: 108 WAPSPARGRTKAAVAPAAAAAVVAAASAGGGREMGCRAGRSTCSLHGTTT 157
>04_03_1017 + 21747044-21748051
Length = 335
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 297 AAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRS 187
A+P TP SP+ + A SS ES +R A P S
Sbjct: 158 ASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYS 194
>04_01_0003 +
79564-79698,79879-79956,81025-81388,82399-82437,
82561-82601,83258-83362,83914-83919,84044-84123,
86744-86913,87664-87748,88067-88125,88451-88464
Length = 391
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 414 FVKVQSLEDTEXRWEYHQRXSGI 482
F+KVQ E+ E W YH G+
Sbjct: 51 FLKVQKSENKEDEWRYHVHYLGL 73
>03_05_0429 -
24157060-24157671,24158000-24158468,24158679-24158752,
24159231-24159280,24159368-24159449,24159526-24159575,
24159666-24159708,24159804-24159884,24159988-24160033,
24160151-24160197,24160358-24160423,24160701-24160767,
24160913-24160998
Length = 590
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 330 LSRRARSWAPTAAPYPTPLSPTPKTARSSISAVTE 226
++R AR + P P P S TPK SSIS + +
Sbjct: 394 VNRSARVIRRASLPLPLPSSETPKRGVSSISILEQ 428
>03_04_0243 + 19298293-19299117
Length = 274
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -3
Query: 312 SWAPTAAPYPTPLSPT-PKTARSSIS 238
SW+ T+AP P SPT P+ ARSS++
Sbjct: 193 SWSRTSAP-PASSSPTSPRRARSSLT 217
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTES 223
+P P PTP+ P P A S +AV +S
Sbjct: 5 SPEPPPNPTPVPPPPPPAPSGNTAVEDS 32
>01_06_0513 - 29944888-29945943
Length = 351
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 324 RRARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMR 178
R A + A AP PTP TP+ + S A+ ++ R V GR ++R
Sbjct: 77 RPAPATATATAPAPTPARGTPEWSEGSTFALLDAWGDR-FVRAGRRSLR 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,182,345
Number of Sequences: 37544
Number of extensions: 318755
Number of successful extensions: 1356
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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