Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1504
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 42 3e-04
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 36 0.018
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 35 0.032
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 35 0.032
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 33 0.13
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 32 0.29
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 31 0.39
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 31 0.39
U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical pr... 31 0.52
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 30 0.90
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 29 1.6
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 29 1.6
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 3.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 3.6
AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical ... 28 3.6
Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF040643-3|AAB94959.1| 128|Caenorhabditis elegans Hypothetical ... 28 4.8
AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box transcr... 28 4.8
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 8.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 8.4
AF067937-2|AAF99916.1| 381|Caenorhabditis elegans Choline kinas... 27 8.4
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 274 FPHPEDCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPE 152
F P DC KF C NG+ CP+G ++ DT MCD P+
Sbjct: 572 FGVPSDCLKFIRCVNGIS-YNFECPNGLSFHADTMMCDRPD 611
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 274 FPHPEDCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENY 128
+ + DC C G + SC S +N+ T CD P+KV GCEN+
Sbjct: 1190 YRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENH 1238
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 301 NGRSLPHPTF-PHPEDCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYY 125
NG H +F +C+ FY C G + +CPSG V+N +CD P V C
Sbjct: 1242 NGECSEHGSFIADANNCEVFYRCVWGRKVVM-TCPSGTVFNPLLSVCDWPSAVPSC---- 1296
Query: 124 DGQPLDKN 101
GQ D N
Sbjct: 1297 SGQASDSN 1304
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 259 DCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENY 128
DC+ +YI N + CP+G Y++ CD E V C Y
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEY 842
Score = 34.7 bits (76), Expect = 0.042
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 259 DCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENY 128
DC+K+ I + K CPSG Y+ CD E V GC Y
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPEY 743
Score = 33.5 bits (73), Expect = 0.097
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 247 FYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENY 128
F+ C NG +K +CP +Y D +CD PE V C Y
Sbjct: 221 FWQCSNGKLFRK-TCPEKLIYVLDQNLCDFPESVKDCPEY 259
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 247 FYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENY 128
FYIC NG Q +CP+ ++N CD V C+ Y
Sbjct: 591 FYICANG-QVVATTCPANLIFNPYVGECDYSTNVRDCQGY 629
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 268 HPEDCQKFYI-CRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYY 125
H + C YI C NG + G+C + VYN DT C+ C N Y
Sbjct: 1033 HLKMCSPHYIVCDNG-RAFSGTCIAPLVYNGDTQTCNYKSTNKDCGNDY 1080
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 262 EDCQK-FYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYY 125
E C K F+ C +G + CP V+N+ T CD E CE Y
Sbjct: 444 EACTKSFFTCHDG-RAFANDCPGDLVFNKATGTCDFAE---NCEKNY 486
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 259 DCQ-KFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCE 134
+C+ +F C G+ + CP+ +YNE +CD V+GCE
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 238 CRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGC 137
C+NG CPS V+N+ + +CD P+ + C
Sbjct: 422 CQNG-HVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 268 HPED-CQ-KFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYYDGQP 113
HP C F C G+ + CP+ V+N +CD P V C QP
Sbjct: 255 HPNGVCSTNFLTCSGGIA-RIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQP 307
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 259 DCQ-KFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCE 134
+C+ +F C G+ + CP+ +YNE +CD V+GCE
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 238 CRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGC 137
C+NG CPS V+N+ + +CD P+ + C
Sbjct: 422 CQNG-HVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 268 HPED-CQ-KFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYYDGQP 113
HP C F C G+ + CP+ V+N +CD P V C QP
Sbjct: 255 HPNGVCSTNFLTCSGGIA-RIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQP 307
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
protein F44E2.4 protein.
Length = 1283
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHP 196
APTA P P P +PTP A S S + + + E V P
Sbjct: 632 APTAKPLPIPSAPTPPVASSKCS-IEDQKKFEECVKP 667
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 259 DCQ-KFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGC 137
DC + C+NG + CP V+NE++ +CD PE + C
Sbjct: 321 DCTPRVLSCQNG-RENIFECPPSLVFNENSLICDYPETSLKC 361
Score = 31.1 bits (67), Expect = 0.52
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 247 FYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGC 137
F+ C G+ ++ +CP+ V+N CD P+ V+ C
Sbjct: 194 FFSCSEGIAHRR-NCPANLVFNPAISSCDWPKNVMDC 229
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 247 FYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCE 134
F C NG+ P CP G +++E MCD V C+
Sbjct: 255 FSACTNGI-PIVMFCPDGLMFSEKNQMCDYEWNVDECD 291
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 312 SWAPTAAPYPTPLSPTPKTARSSISAVTESNRK 214
S A + AP P++PTPK A+SS + +RK
Sbjct: 371 SRASSVAPQSAPIAPTPKVAKSSAPKEPKESRK 403
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 312 SWAPTAAPYPTPLSPTPKTARSSISAVTESNRK 214
S A + AP P++PTPK A+SS + +RK
Sbjct: 371 SRASSVAPQSAPIAPTPKVAKSSAPKEPKESRK 403
>U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical
protein F58G4.4 protein.
Length = 267
Score = 31.1 bits (67), Expect = 0.52
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 280 PTFPHPEDCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYYDGQ 116
P+F P+ CQ Y C +G + + CP K N D E C++ Y G+
Sbjct: 133 PSFYGPK-CQ--YYCTSGEKCSRDECPKRKCQNNSQCQFDGSESKCVCQSGYIGE 184
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 30.3 bits (65), Expect = 0.90
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 303 PTAAPYPTPLSPTPKTARSSISAVTESNRKREAVHPGRS 187
P A P P PTP AR+ ++SNR A HP S
Sbjct: 1352 PNAIPVERPKQPTPSKARTPSKTPSQSNR---AQHPASS 1387
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTESN 220
AP A P P+P P P T+ SS++ SN
Sbjct: 518 APQAPPTPSPADPGPTTSSSSLTQDPASN 546
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTESN 220
AP + P P+P P P T+ SS++ SN
Sbjct: 481 APQSPPTPSPADPGPTTSSSSLTQDPASN 509
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTESN 220
AP A P P+P P P T+ SS++ SN
Sbjct: 518 APQAPPTPSPADPGPTTSSSSLTQDPASN 546
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 306 APTAAPYPTPLSPTPKTARSSISAVTESN 220
AP + P P+P P P T+ SS++ SN
Sbjct: 481 APQSPPTPSPADPGPTTSSSSLTQDPASN 509
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 330 LSRRARSWAPTAAPYPTPLSPTPKTARSS 244
L ++A + A A P PTP+ PTP T SS
Sbjct: 736 LEKKAAA-AAAANPNPTPIPPTPATPHSS 763
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 330 LSRRARSWAPTAAPYPTPLSPTPKTARSS 244
L ++A + A A P PTP+ PTP T SS
Sbjct: 736 LEKKAAA-AAAANPNPTPIPPTPATPHSS 763
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1785 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1840
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1878 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1933
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1878 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1933
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1785 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1840
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1878 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1933
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1878 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1933
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 430 DCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ T + PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1877 EVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1932
>AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical
protein F18A12.5 protein.
Length = 700
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 193 KVYNED-TFMCDDPEKVVGCENYYDGQPLDKNKLPKK 86
K Y++ T C+D K CENY D Q LD+++ KK
Sbjct: 77 KAYSDTATKSCEDFYKAT-CENYKDHQALDRHRDCKK 112
>Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical
protein T07C4.6 protein.
Length = 292
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 303 PTAAPYPTPLSPTPKTARSSISAVTESNRKRE 208
P A P+ +PL TP ++ S +S V E +++ E
Sbjct: 254 PFAFPFLSPLPSTPSSSSSELSIVKEEDQEVE 285
>AF040643-3|AAB94959.1| 128|Caenorhabditis elegans Hypothetical
protein F14D2.5 protein.
Length = 128
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 318 ARSWAPTAAPYPTPLSPTPKTARSSISAVTESNRKREA 205
AR P P P P++P P RS I + + + EA
Sbjct: 59 ARQGLPLVTPAPVPVAPAPIAPRSPILTRSRTRQLAEA 96
>AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box
transcription factor TBX-9 protein.
Length = 292
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 303 PTAAPYPTPLSPTPKTARSSISAVTESNRKRE 208
P A P+ +PL TP ++ S +S V E +++ E
Sbjct: 254 PFAFPFLSPLPSTPSSSSSELSIVKEEDQEVE 285
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -2
Query: 415 KRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1696 QEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1746
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -2
Query: 415 KRPPTATGKK*STGNATKSQKMFWMMVSPVPTGEVM--GPNGRSLPHPTFP 269
+ PPTA + + + F + + PT ++ GPNG LPH P
Sbjct: 1696 QEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWTGPNGSPLPHDVTP 1746
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 285 PTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIR 172
P L+P P AR +AV E RK+ A+ + + +R
Sbjct: 1462 PEGLAPEPLIARKRSTAVQEVRRKKSAIEVVKKSCTLR 1499
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 285 PTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIR 172
P L+P P AR +AV E RK+ A+ + + +R
Sbjct: 243 PEGLAPEPLIARKRSTAVQEVRRKKSAIEVVKKSCTLR 280
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 285 PTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIR 172
P L+P P AR +AV E RK+ A+ + + +R
Sbjct: 1462 PEGLAPEPLIARKRSTAVQEVRRKKSAIEVVKKSCTLR 1499
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 285 PTPLSPTPKTARSSISAVTESNRKREAVHPGRSTMRIR 172
P L+P P AR +AV E RK+ A+ + + +R
Sbjct: 243 PEGLAPEPLIARKRSTAVQEVRRKKSAIEVVKKSCTLR 280
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 428 LYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDG 318
L+ ++ TS C +R C+ TK+ + G +CP G
Sbjct: 607 LHPNDPTSRCVLPAECDRGCEDPTKEFMTCGSSCPMG 643
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 428 LYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDG 318
L+ ++ TS C +R C+ TK+ + G +CP G
Sbjct: 398 LHPNDPTSRCVLPAECDRGCEDPTKEFMTCGSSCPMG 434
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 495 QACDKFHXCADGIPNEXPCPPGTV 424
Q CD CADG +E CP TV
Sbjct: 114 QRCDNITDCADG-SDEKDCPASTV 136
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 495 QACDKFHXCADGIPNEXPCPPGTV 424
Q CD CADG +E CP TV
Sbjct: 114 QRCDNITDCADG-SDEKDCPASTV 136
>AF067937-2|AAF99916.1| 381|Caenorhabditis elegans Choline kinase b
protein 4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 244 YICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYYDGQPLDKNKLPKK 86
++C N + P G V ++D +M + P + CE Y D Q K PK+
Sbjct: 256 FLCENAFD-YRDPTPPGLVIDQD-YMENHPNLQIFCEAYIDTQYKMKTANPKQ 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,772,237
Number of Sequences: 27780
Number of extensions: 258685
Number of successful extensions: 1155
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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