Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1503
(339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein. 32 0.52
AK022696-1|BAB14186.1| 938|Homo sapiens protein ( Homo sapiens ... 32 0.52
BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein. 31 1.2
BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein. 31 1.2
AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4... 31 1.2
AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4... 31 1.2
AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4... 31 1.2
U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein. 30 1.6
U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mut... 30 1.6
U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia pro... 30 1.6
U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein. 30 1.6
U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-ki... 30 1.6
AK075128-1|BAC11420.1| 672|Homo sapiens protein ( Homo sapiens ... 30 2.1
AK074744-1|BAC11175.1| 672|Homo sapiens protein ( Homo sapiens ... 30 2.1
AK074210-1|BAB85017.1| 296|Homo sapiens protein ( Homo sapiens ... 30 2.1
AF450090-1|AAL47020.1| 672|Homo sapiens KCCR13L protein. 30 2.1
BC027603-1|AAH27603.1| 672|Homo sapiens diacylglycerol lipase, ... 29 2.8
AK093958-1|BAC04258.1| 391|Homo sapiens protein ( Homo sapiens ... 29 2.8
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 29 2.8
BC146808-1|AAI46809.1| 402|Homo sapiens C9orf128 protein protein. 29 3.7
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 29 4.8
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 29 4.8
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 29 4.8
BC052577-1|AAH52577.1| 963|Homo sapiens phosphofurin acidic clu... 28 6.4
BC015649-1|AAH15649.1| 587|Homo sapiens BTB (POZ) domain contai... 28 6.4
BC010096-1|AAH10096.1| 963|Homo sapiens phosphofurin acidic clu... 28 6.4
AY320283-1|AAQ67682.1| 963|Homo sapiens endosome-TGN sorting co... 28 6.4
AL591038-1|CAI11059.1| 587|Homo sapiens BTB (POZ) domain contai... 28 6.4
AL355574-2|CAI14117.1| 587|Homo sapiens BTB (POZ) domain contai... 28 6.4
AK124976-1|BAC86013.1| 173|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK096644-1|BAC04831.1| 829|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK056361-1|BAB71164.1| 750|Homo sapiens protein ( Homo sapiens ... 28 6.4
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 28 8.5
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 28 8.5
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 28 8.5
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 28 8.5
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 28 8.5
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 28 8.5
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 28 8.5
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 28 8.5
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 28 8.5
>BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.
Length = 1139
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = -2
Query: 191 IKQEPLDDYSMEQ---HEGLMIKQEPPDE 114
IK+EPLDDY E EG+ +KQE DE
Sbjct: 381 IKEEPLDDYDYELGECPEGVTVKQEETDE 409
>AK022696-1|BAB14186.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ12634 fis, clone NT2RM4001858, weakly similar to
T-BOX CONTAINING PROTEIN TBX6L. ).
Length = 938
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = -2
Query: 191 IKQEPLDDYSMEQ---HEGLMIKQEPPDE 114
IK+EPLDDY E EG+ +KQE DE
Sbjct: 185 IKEEPLDDYDYELGECPEGVTVKQEETDE 213
>BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein.
Length = 1516
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 230 GTRNTSSSPSXIHIKQEPLD---DYSMEQHEGLM--IKQEPPDETKYN 102
G+ +S S I IK+EPLD D +M +GL+ IK EP + +Y+
Sbjct: 204 GSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQEYS 251
>BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein.
Length = 1434
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 230 GTRNTSSSPSXIHIKQEPLD---DYSMEQHEGLM--IKQEPPDETKYN 102
G+ +S S I IK+EPLD D +M +GL+ IK EP + +Y+
Sbjct: 122 GSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQEYS 169
>AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 230 GTRNTSSSPSXIHIKQEPLD---DYSMEQHEGLM--IKQEPPDETKYN 102
G+ +S S I IK+EPLD D +M +GL+ IK EP + +Y+
Sbjct: 236 GSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQEYS 283
>AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 230 GTRNTSSSPSXIHIKQEPLD---DYSMEQHEGLM--IKQEPPDETKYN 102
G+ +S S I IK+EPLD D +M +GL+ IK EP + +Y+
Sbjct: 236 GSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQEYS 283
>AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 230 GTRNTSSSPSXIHIKQEPLD---DYSMEQHEGLM--IKQEPPDETKYN 102
G+ +S S I IK+EPLD D +M +GL+ IK EP + +Y+
Sbjct: 236 GSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQEYS 283
>U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 182 EPLDDYSMEQHEGLMIKQEPPDETKYNPDL 93
+PL D++M + L ++Q P DET+ +P L
Sbjct: 2955 DPLFDWTMNPLKALYLQQRPEDETELHPTL 2984
>U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mutated
protein.
Length = 1708
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 182 EPLDDYSMEQHEGLMIKQEPPDETKYNPDL 93
+PL D++M + L ++Q P DET+ +P L
Sbjct: 1607 DPLFDWTMNPLKALYLQQRPEDETELHPTL 1636
>U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia protein.
Length = 3056
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 182 EPLDDYSMEQHEGLMIKQEPPDETKYNPDL 93
+PL D++M + L ++Q P DET+ +P L
Sbjct: 2955 DPLFDWTMNPLKALYLQQRPEDETELHPTL 2984
>U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 182 EPLDDYSMEQHEGLMIKQEPPDETKYNPDL 93
+PL D++M + L ++Q P DET+ +P L
Sbjct: 2955 DPLFDWTMNPLKALYLQQRPEDETELHPTL 2984
>U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-kinase
homolog protein.
Length = 1708
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 182 EPLDDYSMEQHEGLMIKQEPPDETKYNPDL 93
+PL D++M + L ++Q P DET+ +P L
Sbjct: 1607 DPLFDWTMNPLKALYLQQRPEDETELHPTL 1636
>AK075128-1|BAC11420.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ90647 fis, clone PLACE1004282, highly similar to
KCCR13L. ).
Length = 672
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 45 CCTCTFLWVYGGQYMEQIRVVLGLIRRFLLDHQPFVLFHRVVVERLLFDVYVARA*ACVP 224
CC+ E ++++G + L DH P +L R L V RA ACV
Sbjct: 610 CCSAAHYSAKWSHEAEFSKILIG--PKMLTDHMPDILM------RALDSVVSDRA-ACVS 660
Query: 225 CPGSGVSA 248
CP GVS+
Sbjct: 661 CPAQGVSS 668
>AK074744-1|BAC11175.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ90263 fis, clone NT2RM4000997, highly similar to
KCCR13L. ).
Length = 672
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 45 CCTCTFLWVYGGQYMEQIRVVLGLIRRFLLDHQPFVLFHRVVVERLLFDVYVARA*ACVP 224
CC+ E ++++G + L DH P +L R L V RA ACV
Sbjct: 610 CCSAAHYSAKWSHEAEFSKILIG--PKMLTDHMPDILM------RALDSVVSDRA-ACVS 660
Query: 225 CPGSGVSA 248
CP GVS+
Sbjct: 661 CPAQGVSS 668
>AK074210-1|BAB85017.1| 296|Homo sapiens protein ( Homo sapiens
cDNA FLJ23630 fis, clone CAS03240. ).
Length = 296
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 45 CCTCTFLWVYGGQYMEQIRVVLGLIRRFLLDHQPFVLFHRVVVERLLFDVYVARA*ACVP 224
CC+ E ++++G + L DH P +L R L V RA ACV
Sbjct: 234 CCSAAHYSAKWSHEAEFSKILIG--PKMLTDHMPDILM------RALDSVVSDRA-ACVS 284
Query: 225 CPGSGVSA 248
CP GVS+
Sbjct: 285 CPAQGVSS 292
>AF450090-1|AAL47020.1| 672|Homo sapiens KCCR13L protein.
Length = 672
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 45 CCTCTFLWVYGGQYMEQIRVVLGLIRRFLLDHQPFVLFHRVVVERLLFDVYVARA*ACVP 224
CC+ E ++++G + L DH P +L R L V RA ACV
Sbjct: 610 CCSAAHYSAKWSHEAEFSKILIG--PKMLTDHMPDILM------RALDSVVSDRA-ACVS 660
Query: 225 CPGSGVSA 248
CP GVS+
Sbjct: 661 CPAQGVSS 668
>BC027603-1|AAH27603.1| 672|Homo sapiens diacylglycerol lipase,
beta protein.
Length = 672
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 45 CCTCTFLWVYGGQYMEQIRVVLGLIRRFLLDHQPFVLFHRVVVERLLFDVYVARA*ACVP 224
CC+ E ++++G + L DH P +L R L V RA ACV
Sbjct: 610 CCSAAHYSAKWSHEAEFSKILIG--PKMLTDHMPDILM------RALDSVVSDRA-ACVS 660
Query: 225 CPGSGVSA 248
CP GVS+
Sbjct: 661 CPARGVSS 668
>AK093958-1|BAC04258.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ36639 fis, clone TRACH2019046. ).
Length = 391
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 45 CCTCTFLWVYGGQYMEQIRVVLGLIRRFLLDHQPFVLFHRVVVERLLFDVYVARA*ACVP 224
CC+ E ++++G + L DH P +L R L V RA ACV
Sbjct: 329 CCSAAHYSAKWSHEAEFSKILIG--PKMLTDHMPDILM------RALDSVVSDRA-ACVS 379
Query: 225 CPGSGVSA 248
CP GVS+
Sbjct: 380 CPARGVSS 387
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA +ADD A T G Q QP S + P+ +++ +I F
Sbjct: 70 QTHSEQSPADTSAQTVSGTATQADDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 126
>BC146808-1|AAI46809.1| 402|Homo sapiens C9orf128 protein protein.
Length = 402
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2
Query: 248 SAHAAPGTRNTSSSPSXIHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPDLFHVLTPIH 69
S P +TS SP Q PL+ +S E H+ I + P + Y L ++ +
Sbjct: 43 STSETPLEPHTSESPLVPSPSQIPLEAHSPETHQEPSISETPSETPTYEASLDSPISVV- 101
Query: 68 PEK 60
PEK
Sbjct: 102 PEK 104
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 257 GTRSAHAAPGTRNTSSSPSXIHIKQEPLDDYSMEQHEG 144
G ++ + PG ++ + S IH+ EP +D ++ H G
Sbjct: 855 GKETSPSHPGFKDQGADSSQIHVPVEPQEDNNLPTHGG 892
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 257 GTRSAHAAPGTRNTSSSPSXIHIKQEPLDDYSMEQHEG 144
G ++ + PG ++ + S IH+ EP +D ++ H G
Sbjct: 582 GKETSPSHPGFKDQGADSSQIHVPVEPQEDNNLPTHGG 619
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 257 GTRSAHAAPGTRNTSSSPSXIHIKQEPLDDYSMEQHEG 144
G ++ + PG ++ + S IH+ EP +D ++ H G
Sbjct: 855 GKETSPSHPGFKDQGADSSQIHVPVEPQEDNNLPTHGG 892
>BC052577-1|AAH52577.1| 963|Homo sapiens phosphofurin acidic
cluster sorting protein 1 protein.
Length = 963
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 203 SXIHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPDLFH 87
S + + +D+YS E+ E +QE D+ + DLF+
Sbjct: 265 SKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFY 303
>BC015649-1|AAH15649.1| 587|Homo sapiens BTB (POZ) domain
containing 14A protein.
Length = 587
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 222 PCPGSGVSASCPFESGEGS-ERERDPAAAA 308
P P G S PFE G G R + PAAAA
Sbjct: 547 PLPADGQSPPQPFEQGGGGPSRPQTPAAAA 576
>BC010096-1|AAH10096.1| 963|Homo sapiens phosphofurin acidic
cluster sorting protein 1 protein.
Length = 963
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 203 SXIHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPDLFH 87
S + + +D+YS E+ E +QE D+ + DLF+
Sbjct: 265 SKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFY 303
>AY320283-1|AAQ67682.1| 963|Homo sapiens endosome-TGN sorting
connector protein.
Length = 963
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 203 SXIHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPDLFH 87
S + + +D+YS E+ E +QE D+ + DLF+
Sbjct: 265 SKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFY 303
>AL591038-1|CAI11059.1| 587|Homo sapiens BTB (POZ) domain
containing 14A protein.
Length = 587
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 222 PCPGSGVSASCPFESGEGS-ERERDPAAAA 308
P P G S PFE G G R + PAAAA
Sbjct: 547 PLPADGQSPPQPFEQGGGGPSRPQTPAAAA 576
>AL355574-2|CAI14117.1| 587|Homo sapiens BTB (POZ) domain
containing 14A protein.
Length = 587
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 222 PCPGSGVSASCPFESGEGS-ERERDPAAAA 308
P P G S PFE G G R + PAAAA
Sbjct: 547 PLPADGQSPPQPFEQGGGGPSRPQTPAAAA 576
>AK124976-1|BAC86013.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ42986 fis, clone BRTHA2008535. ).
Length = 173
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -2
Query: 197 IHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPD--LFHVLTPIHPEKCTCTAFD 39
IHI Q L++ E+ G + + P D T PD LFH L + C + +
Sbjct: 24 IHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQALFHSLNSSLSQACASPSME 78
>AK096644-1|BAC04831.1| 829|Homo sapiens protein ( Homo sapiens
cDNA FLJ39325 fis, clone OCBBF2015334, highly similar to
Rattus norvegicus cytosolic sorting protein PACS-1a
(PACS-1) ).
Length = 829
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 203 SXIHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPDLFH 87
S + + +D+YS E+ E +QE D+ + DLF+
Sbjct: 215 SKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFY 253
>AK056361-1|BAB71164.1| 750|Homo sapiens protein ( Homo sapiens
cDNA FLJ31799 fis, clone NT2RI2009037, highly similar to
Rattus norvegicus cytosolic sorting protein PACS-1a
(PACS-1) ).
Length = 750
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 203 SXIHIKQEPLDDYSMEQHEGLMIKQEPPDETKYNPDLFH 87
S + + +D+YS E+ E +QE D+ + DLF+
Sbjct: 136 SKLSDRSPDIDNYSEEEEESFSSEQEGSDDPLHGQDLFY 174
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 70 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 126
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 50 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 106
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 204 EXHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQPGSVPCIDPHTPREMYMYSI*F 37
+ H+ Q+ A + + + GTA + DD A T G Q QP S + P+ +++ +I F
Sbjct: 90 QTHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQP-SENTENKSQPKRLHVSNIPF 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,423,215
Number of Sequences: 237096
Number of extensions: 758326
Number of successful extensions: 7796
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 7746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7796
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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