Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1499
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   3.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   4.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.4  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   5.8  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    24   5.8  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 318  NGKSINFKLVARIHRVSIPYIRNCSLINCMTLFFS*C 208
            NGK  + +L+ R++RV  P    CS I+ +   F+ C
Sbjct: 965  NGKISHGELLHRMNRVPSPSCSFCSAIDTLEHKFAGC 1001


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/65 (21%), Positives = 28/65 (43%)
 Frame = -3

Query: 682 ANSGLPNPIIETSMKKIREEAKWSIENIPVIEKWLDDYVARYGVKDELLVQNK*YHRVYK 503
           + +GLP+P  +  ++   +E    I    +  +W   Y    G  D +L+    + ++ K
Sbjct: 19  SQTGLPDPFAKILVEGTTQEYTTEICKASLDPRWNSHYDLFLGKNDSILITIYNHRKMPK 78

Query: 502 FDGFL 488
              FL
Sbjct: 79  RQAFL 83


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 539 QFVFDSVSSYIVIQPFFYDRYVLDG 613
           QF FD     + + P+ Y+R V  G
Sbjct: 115 QFAFDLKCDSVCVNPYHYERVVSPG 139


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 232 YDFILQLVSLFFL*Y*DDEC 173
           +DFIL LV+ FF+ +   EC
Sbjct: 14  WDFILGLVAFFFIPFPSVEC 33


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 604 NIPVIEKWLDDYVARYGVKD 545
           N+P+   W+DD++ +  + D
Sbjct: 194 NVPMFRGWIDDHLRQRNITD 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,328
Number of Sequences: 2352
Number of extensions: 13371
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)