Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1499
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    31   0.87 
U43283-7|AAC69018.1|  537|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical...    28   6.2  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    28   6.2  
AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z70287-4|CAA94297.1|  299|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +2

Query: 527 VLNQQFVFDSVSSYIVIQP--FFYDRYVLDGPFGFFAYLLHGSLYDGVRQTRIRPGELR 697
           + ++  + D    Y  I+P  F Y+ Y+ D P       +HGS++DGV +  I+ GE R
Sbjct: 88  LFHEDHMSDVDGGYADIKPSHFLYEGYLKDDPNSH----VHGSVFDGVFEGHIQTGEGR 142


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +2

Query: 527 VLNQQFVFDSVSSYIVIQP--FFYDRYVLDGPFGFFAYLLHGSLYDGVRQTRIRPGELR 697
           + ++  + D    Y  I+P  F Y+ Y+ D P       +HGS++DGV +  I+ GE R
Sbjct: 88  LFHEDHMSDVDGGYADIKPSHFLYEGYLKDDPNSH----VHGSVFDGVFEGHIQTGEGR 142


>U43283-7|AAC69018.1|  537|Caenorhabditis elegans Hypothetical
           protein T25G12.2 protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 585 NGWMTM*LDTESKTNCWFKTNDITEFI 505
           +GW+T+ L+  SKT C FK  +IT  +
Sbjct: 346 SGWITIALNGTSKTFCTFKFQEITSIV 372


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 671 SAEPHHRDFHEEDTRRSQMVHREHTGHRKM 582
           S E H    H+ D    Q++ + HT HR++
Sbjct: 44  SEELHDHHEHDHDHHDEQLIRKNHTSHREI 73


>AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5b protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 725 RDSDLVSNLYVAHQGEFGSAEPHHRDFHEEDTRRSQMVHREHTGHRKM 582
           RD+D  +N+    Q    S+  HH   +  + R+S  V R    +R M
Sbjct: 89  RDADRSNNIAARIQAPVVSSSTHHHHSNRHENRKSTAVKRPAADNRPM 136


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 725 RDSDLVSNLYVAHQGEFGSAEPHHRDFHEEDTRRSQMVHREHTGHRKM 582
           RD+D  +N+    Q    S+  HH   +  + R+S  V R    +R M
Sbjct: 134 RDADRSNNIAARIQAPVVSSSTHHHHSNRHENRKSTAVKRPAADNRPM 181


>AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical
           protein Y119D3B.12a protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 656 HRDFHEEDTRRSQMVHREHTGHRK 585
           HRD    D R     HREH  HR+
Sbjct: 291 HRDHRHRDHRGEHREHREHKEHRR 314


>Z70287-4|CAA94297.1|  299|Caenorhabditis elegans Hypothetical
           protein R09E10.6 protein.
          Length = 299

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 749 PLDNSRPKRDSDLVSNLYVAHQGEFGSAEPHHRDFHEEDTRRSQMVHR 606
           P      K     +S++YV HQG     EP   D  EE   + Q+V +
Sbjct: 231 PASEQLSKSSDPNISSMYVFHQGIQVKQEPIDDDQEEEQQVQKQLVFK 278


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 51  FTSAFT-NKFLFKINSRFTIIVCKIYKYTYPINNDIIMN 164
           F+S  T  K  +K  S+F   + K+Y+Y YP++  + +N
Sbjct: 180 FSSMKTMKKAFYKCISKFPAFMQKLYEYNYPLSGFLELN 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,599,686
Number of Sequences: 27780
Number of extensions: 316212
Number of successful extensions: 751
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)