Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1491
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein. 30 4.1
BC000584-1|AAH00584.2| 243|Homo sapiens SCARF2 protein protein. 30 4.1
AY129950-3|AAN71727.1| 788|Homo sapiens cAMP-specific phosphodi... 30 4.1
AY129950-2|AAN71726.1| 838|Homo sapiens cAMP-specific phosphodi... 30 4.1
AY129950-1|AAN71725.1| 885|Homo sapiens cAMP-specific phosphodi... 30 4.1
AY129949-1|AAN71724.1| 788|Homo sapiens cAMP-specific phosphodi... 30 4.1
AY129948-1|AAN71723.1| 838|Homo sapiens cAMP-specific phosphodi... 30 4.1
AL831924-1|CAD38584.1| 843|Homo sapiens hypothetical protein pr... 30 4.1
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 30 4.1
AF079529-1|AAC69564.2| 885|Homo sapiens cAMP-specific phosphodi... 30 4.1
AB085827-1|BAC53765.1| 865|Homo sapiens phosphodiesterase 8B4 p... 30 4.1
AB085826-1|BAC53764.1| 830|Homo sapiens phosphodiesterase 8B3 p... 30 4.1
AB085825-1|BAC53763.1| 788|Homo sapiens phosphodiestearse 8B2 p... 30 4.1
AB085824-1|BAC53762.1| 885|Homo sapiens phosphodiesterase 8B1 p... 30 4.1
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 30 4.1
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 30 4.1
AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critic... 29 5.4
AF184924-1|AAG23126.1| 85|Homo sapiens zinc finger transcripti... 29 5.4
>BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein.
Length = 595
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 337 RPRATTLHGQ-----AQRSLSPPPRGSEACRSP 420
+P+ + +HG+ A R+ SPPP GSEA SP
Sbjct: 391 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 423
>BC000584-1|AAH00584.2| 243|Homo sapiens SCARF2 protein protein.
Length = 243
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 337 RPRATTLHGQ-----AQRSLSPPPRGSEACRSP 420
+P+ + +HG+ A R+ SPPP GSEA SP
Sbjct: 39 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 71
>AY129950-3|AAN71727.1| 788|Homo sapiens cAMP-specific
phosphodiesterase 8B3 protein.
Length = 788
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AY129950-2|AAN71726.1| 838|Homo sapiens cAMP-specific
phosphodiesterase 8B2 protein.
Length = 838
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AY129950-1|AAN71725.1| 885|Homo sapiens cAMP-specific
phosphodiesterase 8B1 protein.
Length = 885
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AY129949-1|AAN71724.1| 788|Homo sapiens cAMP-specific
phosphodiesterase 8B3 protein.
Length = 788
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AY129948-1|AAN71723.1| 838|Homo sapiens cAMP-specific
phosphodiesterase 8B2 protein.
Length = 838
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AL831924-1|CAD38584.1| 843|Homo sapiens hypothetical protein
protein.
Length = 843
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 26 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 65
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 337 RPRATTLHGQ-----AQRSLSPPPRGSEACRSP 420
+P+ + +HG+ A R+ SPPP GSEA SP
Sbjct: 667 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 699
>AF079529-1|AAC69564.2| 885|Homo sapiens cAMP-specific
phosphodiesterase 8B1 protein.
Length = 885
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AB085827-1|BAC53765.1| 865|Homo sapiens phosphodiesterase 8B4
protein.
Length = 865
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AB085826-1|BAC53764.1| 830|Homo sapiens phosphodiesterase 8B3
protein.
Length = 830
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AB085825-1|BAC53763.1| 788|Homo sapiens phosphodiestearse 8B2
protein.
Length = 788
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AB085824-1|BAC53762.1| 885|Homo sapiens phosphodiesterase 8B1
protein.
Length = 885
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 413 RQASXPRGGGLSDRCACPWSVVARGRRRTCAPRSLCESST 294
R+A G G S A P + +RGRRR C + E+ T
Sbjct: 68 RRARTELGSGSSAGSAAPAATTSRGRRRHCCSSAEAETQT 107
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 337 RPRATTLHGQ-----AQRSLSPPPRGSEACRSP 420
+P+ + +HG+ A R+ SPPP GSEA SP
Sbjct: 662 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 694
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 337 RPRATTLHGQ-----AQRSLSPPPRGSEACRSP 420
+P+ + +HG+ A R+ SPPP GSEA SP
Sbjct: 662 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 694
>AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critical
region candidate gene number 6 protein.
Length = 578
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 371 CACPWSVVARGRRRTCAPRSLC 306
C CP RGRRR CAP C
Sbjct: 175 CGCPDRPGRRGRRRGCAPSPRC 196
>AF184924-1|AAG23126.1| 85|Homo sapiens zinc finger transcription
factor BTEB2 protein.
Length = 85
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 325 HVRRRPRATTLHGQAQRSLSPPPRGSEACRSP 420
H RP+A QA + SPPP + A R P
Sbjct: 53 HAHHRPQAQPAPAQAPQPPSPPPPAAAASRGP 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,477,786
Number of Sequences: 237096
Number of extensions: 984229
Number of successful extensions: 2165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2165
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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