Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1487
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011032-1|AAR30192.1|  330|Drosophila melanogaster RE45514p pro...    28   9.6  
AE014297-2212|AAF55318.2|  330|Drosophila melanogaster CG14883-P...    28   9.6  

>BT011032-1|AAR30192.1|  330|Drosophila melanogaster RE45514p
           protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 302 MLVFCFKYFWMCCNL 346
           ++ FCF  FW+ CNL
Sbjct: 24  LIFFCFNVFWLFCNL 38


>AE014297-2212|AAF55318.2|  330|Drosophila melanogaster CG14883-PA
           protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 302 MLVFCFKYFWMCCNL 346
           ++ FCF  FW+ CNL
Sbjct: 24  LIFFCFNVFWLFCNL 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,358,419
Number of Sequences: 53049
Number of extensions: 308156
Number of successful extensions: 630
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)