Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1483
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016451-9|AAB66005.2|  524|Caenorhabditis elegans Udp-glucurono...    29   2.7  
AL023828-4|CAA19469.1|  462|Caenorhabditis elegans Hypothetical ...    29   3.5  
AL023828-3|CAA19468.1|  572|Caenorhabditis elegans Hypothetical ...    29   3.5  
AL023828-2|CAA19449.1|  570|Caenorhabditis elegans Hypothetical ...    29   3.5  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>AF016451-9|AAB66005.2|  524|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein51 protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 78  SVVYYCLFFISFVSFKTFTYK*FHVRPNKFTIQ*IRTRKKYK 203
           ++ YYC+  I F++F   T+     +  KF++  IR  KK K
Sbjct: 481 NIEYYCVDTIVFIAFSCVTFTYIFFKMAKFSLSFIRLVKKPK 522


>AL023828-4|CAA19469.1|  462|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2c protein.
          Length = 462

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 130 LPINNFTFVPINLPFNKYVHVKNINYINSLIFKTNFPYKL 249
           LP++    +P NLP  KY+ V +  + N + FK N+ +++
Sbjct: 303 LPVDKKLQIPANLPSEKYLPVSHKGF-NLISFKANYFFEV 341


>AL023828-3|CAA19468.1|  572|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2b protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 130 LPINNFTFVPINLPFNKYVHVKNINYINSLIFKTNFPYKL 249
           LP++    +P NLP  KY+ V +  + N + FK N+ +++
Sbjct: 413 LPVDKKLQIPANLPSEKYLPVSHKGF-NLISFKANYFFEV 451


>AL023828-2|CAA19449.1|  570|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2a protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 130 LPINNFTFVPINLPFNKYVHVKNINYINSLIFKTNFPYKL 249
           LP++    +P NLP  KY+ V +  + N + FK N+ +++
Sbjct: 411 LPVDKKLQIPANLPSEKYLPVSHKGF-NLISFKANYFFEV 449


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 356 IASTKKM--FSGAWKDYKVGILLNMNEN 279
           + +TKK+  F G WKD+ + ++ NM  N
Sbjct: 381 VLNTKKLKIFDGKWKDFTIDLIKNMKGN 408


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 356 IASTKKM--FSGAWKDYKVGILLNMNEN 279
           + +TKK+  F G WKD+ + ++ NM  N
Sbjct: 381 VLNTKKLKIFDGKWKDFTIDLIKNMKGN 408


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,453,584
Number of Sequences: 27780
Number of extensions: 215596
Number of successful extensions: 414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)