Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1482
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   1.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   3.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   3.9  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   3.9  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 416  PGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAFFIDPR 526
            P    T  NVR+  + + V+ S+  + QLTA   DPR
Sbjct: 1230 PNISLTHSNVRNSYQLTRVAPSNRTNNQLTAQHQDPR 1266


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 603 PTGYGR*DVNLHARASCRIRHEDHLARGSMKNAVNC 496
           P  Y R D     R+  RI+H D L      N  NC
Sbjct: 557 PASYSRIDT---LRSHLRIKHADRLNAPKFSNPPNC 589


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 603 PTGYGR*DVNLHARASCRIRHEDHLARGSMKNAVNC 496
           P  Y R D     R+  RI+H D L      N  NC
Sbjct: 533 PASYSRIDT---LRSHLRIKHADRLNAPKFSNPPNC 565


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 638 VTFDRWSTLQPRLPDTVDEMSTSTHVP 558
           + F+  +TL    PDT D+   + H+P
Sbjct: 460 LAFETLNTLPATAPDTGDQEQLTDHIP 486


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,457
Number of Sequences: 2352
Number of extensions: 12731
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)