Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1482
(680 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094671-1|AAM11024.1| 1297|Drosophila melanogaster GH03947p pro... 29 5.9
AE013599-1327|AAF58636.1| 1297|Drosophila melanogaster CG9005-PA... 29 5.9
BT029727-1|ABL75784.1| 288|Drosophila melanogaster IP17596p pro... 29 7.8
AY061361-1|AAL28909.1| 940|Drosophila melanogaster LD28662p pro... 29 7.8
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 29 7.8
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 29 7.8
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 29 7.8
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 29 7.8
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 29 7.8
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 29 7.8
>AY094671-1|AAM11024.1| 1297|Drosophila melanogaster GH03947p
protein.
Length = 1297
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 285 IKQHVTTSTNA*RGTRQRDGSRARHEPRNVINVFYAAGPQTGVVLDVSPR 434
IKQH TT++N+ G Q DG A+ N NV + V + PR
Sbjct: 467 IKQHTTTNSNS--GLHQEDGFSAKANVHNFPNVNVSESYSISVSVRSLPR 514
>AE013599-1327|AAF58636.1| 1297|Drosophila melanogaster CG9005-PA
protein.
Length = 1297
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 285 IKQHVTTSTNA*RGTRQRDGSRARHEPRNVINVFYAAGPQTGVVLDVSPR 434
IKQH TT++N+ G Q DG A+ N NV + V + PR
Sbjct: 467 IKQHTTTNSNS--GLHQEDGFSAKANVHNFPNVNVSESYSISVSVRSLPR 514
>BT029727-1|ABL75784.1| 288|Drosophila melanogaster IP17596p
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 428 STDRNVRSKCRCSNVSCSSHYDAQLTA 508
S + N+ + C C+N+SCSS +T+
Sbjct: 87 SNNSNIVTNCSCNNISCSSSNTQPITS 113
>AY061361-1|AAL28909.1| 940|Drosophila melanogaster LD28662p
protein.
Length = 940
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 59 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 103
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 1737 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 1781
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj protein.
Length = 2618
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 1737 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 1781
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 1737 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 1781
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 protein.
Length = 2618
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 1737 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 1781
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 1737 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 1781
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 467 NVSCSSHYDAQLTAFFIDPRAK*SSCRIRHEAR---AWRLTSHR-PY-PVG 604
N S SSH QLTAF P A +RH+ A RLT H+ PY PVG
Sbjct: 1737 NGSSSSHQQQQLTAFHAPPPA------LRHKLAGIGAGRLTVHKWPYLPVG 1781
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,934,876
Number of Sequences: 53049
Number of extensions: 546874
Number of successful extensions: 1384
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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