Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1479
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 62 8e-12
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 25 0.82
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 25 0.82
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 25 0.82
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 5.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 7.6
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 7.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 7.6
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 7.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 7.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 61.7 bits (143), Expect = 8e-12
Identities = 26/89 (29%), Positives = 50/89 (56%)
Frame = -2
Query: 583 DTLXIAQAVIFCNTRRKVDWLXEXMHLRDFTVXAMHGXMDQREREVIMRQFRTGSXRVLI 404
D+ + ++F ++K D++ + ++ ++HG QR+RE + F++G +L+
Sbjct: 447 DSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILV 506
Query: 403 XXDLLARGIDVQQVSCVINYDXPSNRENY 317
+ ARG+D++ VS VINYD P + Y
Sbjct: 507 ATAVAARGLDIKNVSHVINYDLPKGIDEY 535
Score = 25.0 bits (52), Expect = 0.82
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 764 QVILLSATMPDDVLEVSRCFMRD 696
Q ++ SAT PD+V ++R F+ +
Sbjct: 384 QTLMFSATFPDEVQHLARRFLNN 406
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.82
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 205 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 110
+I+ MP +VA L+ G +IF I++ CD+
Sbjct: 86 AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.82
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 205 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 110
+I+ MP +VA L+ G +IF I++ CD+
Sbjct: 86 AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.82
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 205 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 110
+I+ MP +VA L+ G +IF I++ CD+
Sbjct: 86 AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 793 MXSKCCQLMXKSYYFLLPCLMMYWK 719
+ S+ C + +SY + + ++MYWK
Sbjct: 170 LDSQNCTVEIESYGYTVLDVVMYWK 194
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 183 MWPTSFKAPTFFRFIFCVL 127
MW TS + P FF +L
Sbjct: 407 MWSTSLRDPVFFSIYKTIL 425
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2
Query: 769 MXKSYYFLLPCLMMYWKYLDAL*EILYAYLVXKEELTXEGIKQFY 635
M +Y +L ++ W Y + L Y Y+ E L + ++ Y
Sbjct: 1 MRHNYIVILILSLLTWTYAEELYSDKYDYVNIDEILANDRLRNQY 45
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 183 MWPTSFKAPTFFRFIFCVL 127
MW TS + P FF +L
Sbjct: 407 MWSTSLRDPVFFSIYKTIL 425
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2
Query: 769 MXKSYYFLLPCLMMYWKYLDAL*EILYAYLVXKEELTXEGIKQFY 635
M +Y +L ++ W Y + L Y Y+ E L + ++ Y
Sbjct: 1 MRHNYIVILILSLLTWTYAEELYSDKYDYVNIDEILANDRLRNQY 45
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 183 MWPTSFKAPTFFRFIFCVL 127
MW TS + P FF +L
Sbjct: 33 MWSTSLRDPVFFSIYKTIL 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,200
Number of Sequences: 438
Number of extensions: 3288
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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