Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1478
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.     28   5.7  
Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm recept...    27   9.9  
AF016447-12|AAG24014.2|  195|Caenorhabditis elegans Hypothetical...    27   9.9  

>Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 26  ADGHTAHLMVSGYRRPWTSAMPGAEPS 106
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm receptor
           protein 146 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 335 PKCFYYFRAPLMFYVALAYVIKLIFDHMINNMICILKAQ 219
           P C  +  +PL +Y  L Y I  ++      +I +L AQ
Sbjct: 67  PACVVFMESPLKYYPVLGYNITCLYCGSFALVISLLAAQ 105


>AF016447-12|AAG24014.2|  195|Caenorhabditis elegans Hypothetical
           protein C54F6.12 protein.
          Length = 195

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 426 CIYYIIYYNVFSKWQ*IMQVMLN*NSNVSC 337
           C +Y+ Y+NVFSK     ++M     N+SC
Sbjct: 100 CQFYLYYHNVFSKC--AKKLMRRVGQNISC 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,737,883
Number of Sequences: 27780
Number of extensions: 214690
Number of successful extensions: 371
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)